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Natural Prodcast Episode 3: The Primer, Part 3
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … to your extract and try to purify the molecule that’s causing that test to be successful. Right? Because we don’t – … similar to – I used to use a computer analogy when I was teaching it to people who are outside the field. So DNA …
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Natural Prodcast Episode 10: A Primer on Genome Mining
… and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … I would take a collection of those. And I would either use blast or hammer, which are common homology search tools. And … be. That’s still largely homology based, but then you’re using kind of a black box for the rule set. (Like antiSMASH, …
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Natural Prodcast Episode 7: Ben Shen
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … aspects of it. If there were not natural products to teach us about the enediyne structure, we would never know … very first compound was introduced in the early 90s and by using a polymer as a delivery mechanism. So, the polymer …
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Natural Prodcast Episode 21: Elizabeth Parkinson
… DAN: All right. Welcome back to Natural Prodcast. I did it. I’m keeping to my schedule. … your website that-- speaking of hormones, that you're also using hormones as this chemical communication signal. BETSY … I think, discovered in E. coli, but we can utilize blast searches or other things like that in order to find …
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Natural Prodcast Episode 4: Nancy Keller
… DAN: You’re listening to the US Department of Energy Joint Genome … know, you know, if you take a basic microbiology – so I do teach classes too – not how I teach it, but if you hear how … Episode Transcript … contact us on Twitter at @JGI or @danudwary , or by email to [email protected] . We’d love to get your feedback! …
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CalTeach
… CalTeach is a program for undergraduate majors interested in … with concurrent field work in local classrooms and tutoring centers. Cal Teach offers a minor in Science and Math Education, as well as a unique opportunity to complete a California K-12 science or math teaching …
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Single Cell Research Group
… Research in the Woyke laboratory focuses on the utility of single-cell methods to access genetic material of uncultivated taxa of … Phylogenetic diversity estimates show that the gap between … genomes in the public domain, the bulk of which belong to only three phyla. The Woyke group uses single-cell …
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Natural Prodcast Episode 23: Aaron Puri
… DAN: Hey, everybody. Welcome back for another episode of Natural … now I’m working on this the afternoon of the day I’m due to release it, which is not ideal for me keeping myself on … I could see myself going in the future. So, then we were using these probes to look at host pathogen interactions …
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Products
… The JGI has diverse capabilities in: DNA and RNA sequencing, … as well as target cycle times from sample receipt to completion of standard analysis.  Raw data is provided … extensive internal product audit to analyze the scientific value, demand, and costs of current offerings in the JGI …
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Partnerships: Myco-Ed
… The Mycological Curriculum for Education and Discovery  … of coordinated hands-on experiments across fungal biology teaching labs. The purpose of the program is to: train students and professors in laboratory techniques … training in fungal biology and genomics. Myco-Ed aims to integrate real scientific contributions/discoveries into …
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Natural Prodcast Episode 17: Cassandra Quave
… and Sciences. She’s an ethnobotanist and the herbarium curator there, with a broad range of experimental work on plants … It’s awesome. CASSANDRA QUAVE: Yeah, and I’m sorry if I’m using like acronyms to NSF, National Science Foundation, … I think on COVID that we’re getting ready to submit for publication and have found some interesting hits for that as …
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Institutional User Agreements
… Every approved proposal starts with a User Agreement — … Appendix identifies the type of work or specific proposal to be covered under the Agreement. The signing official must … rights in technical data, project reporting to the DOE, and publication requirements. An official with authority is …
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