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Research in the Woyke laboratory focuses on the utility of single-cell methods to access genetic material of … in 1985, which highlights our skewed understanding of microbial metabolism towards a minority of cultivated … … Research Interests … Former Lab Members … Selected Publications … For further details, please reach out to the …

… and other omics technologies.  The exponential growth of DNA sequencing data, coupled with recent computational … survey reveals a new bacterial candidate phylum in geothermal springs.  Nature Commun. 7:10476 Varghese NJ,  et … Science 344(6186):909-13 … Research Efforts … Selected Publications … For further details, please reach out to the …

… starts with a User Agreement — before any work can begin, including the submission of samples for sequencing, or the submission of sequencing … rights in technical data, project reporting to the DOE, and publication requirements. An official with authority is …

… are complex organisms that harbor a fantastic diversity of cell types and associated organisms, including fungal and bacterial symbionts, detrimental microbial pathogens, and associated viruses that all … of plant/environmental responses … Selected Publications … Research Team Alumni … For further details, …

Secondary Metabolites Program focuses on the exploration of secondary metabolites across bacteria, fungi, algae and … These molecules, which are not essential for fundamental growth, provide critical advantages to the organisms producing them, and are often involved in defense, nutrient …

… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … right. So I did a PhD in microbiology at MIT, and I studied microbial ecology. I studied Vibrio species in the ocean, so … is a chemical compound called geosmin that’s produced by soil bacteria that live all over the place. So that smell of …

Data produced and released by the US Department of Energy (DOE) Joint Genome Institute (JGI) are subject to the following Data … PIs or co-PIs) who wish to include use-restricted data in publications, or who wish to redistribute data in any way …

… … DAN: Hey, everybody. Welcome back for another episode of Natural Prodcast. Right now I’m working on this the … could imagine if you have two colonies of bacteria in the soil or something and they’re competing with each other, if … up on previous Natural Prodcast episodes  here . Show Notes Publication: Suo Z et al. A Mesorhizobium japonicum quorum …

… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … changes that nature has made. So secondary metabolism is adaptation of primary metabolism. They’re duplications of … products because they’re easy to find. They grow in the soil. These are the same guys that produce geosmin. And so …

… develop computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial lineages, and reconstruct metabolic properties … Microbiology , 15032. 10.1038/nmicrobiol.2015.32 … Selected Publications … For further details, please reach out to the …

DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … disparate environments. There’s some marine. There’s some soil samples. There’s human gut samples. There’s lots and …

Hey everyone. Welcome back to Natural Prodcast. This continues the series of interviews we recorded at the Society for Industrial … ones express the best in E coli? Which ones are the most thermally stable? And those are important to us before we …