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… DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … Nature Biotechnology, titled ‘A genomic catalog of Earth’s microbiomes’ . (Citation: Nayfach S et al. A Genomic Catalog …

… The Facilities Integrating Collaborations for User Science (FICUS) call … opportunity for researchers to request the capabilities and expertise of multiple DOE National User Facilities in … provides customized analysis, the JGI also participates in publication of results. …

… DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s … Usually, in a lot of cases, we still have to go through publications to get proteins, and their functions, and all … in collaboration with other people, lake sediments. We have microbiomes from different organisms, including the human …

… Our research is focused on the discovery and characterization of novel bacterial, archaeal and eukaryotic microbes and viruses in environmental sequence data. We use multi-omics … coding potential to find novel functions that may impact microbiome structure and biogeochemical cycles. Research …

… The JGI has diverse capabilities in: DNA and RNA sequencing, Sample and library preparation, Biodesign and pathway … Product Description Deliverables Cycle Time FY25 Q1  (median/75th percentile*) DNA Synthesis Constructs <5kb in size Single gene or multiple small genes assembled to …

… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … rich and underappreciated. And we’ve worked both with the microbiome. So, with symbiotic bacteria that live in animals … chance of turning into a pill that could be absorbed orally through that mechanism, instead of having to be injected, …

… of Energy Office of Science user facility, we provide advanced genomic capabilities, large-scale AI-ready data and … expertise to support the global research community in studies of complex biological and environmental systems. We optimize our service to the community through responsibly managing our people and resources. Our …

… Dan Udwary: You’re listening to the Department of Energy Joint Genome Institute’s … started during my PhD. And then I actually found out, through a connection of my supervisor, that in parallel, … we, for example, are really interested in metagenomes and microbiomes and figuring out which gene clusters are …

… Program works to uncover the roles of small molecules in biological systems, linking them with genomic data to enhance our understanding of genome science, organisms, and … of high performance plants and microbes, and understanding microbiome interactions. The  insights derived are crucial …

…   The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a national user facility … National Laboratory. The JGI consists of 225 researchers and support staff in the Integrative Genomics Building in … as the DOE Systems Biology Knowledgebase and the National Microbiome Data Collective.    …

… back to a new session of Natural Prodcast. I’ve got two things I wanted to tell you about in this introduction. First … which includes screening methods, genome mining in cave microbiomes, and using engineered biosynthetic pathways and … notes, which you can always find at naturalprodcast.com or through the JGI website at jgi.doe.gov . There’s a lot more …

… The JGI is leveraging its current partnerships to offer new capabilities and resources to users through a BER data ecosystem.  A data ecosystem is a … (ESNet), the JGI has unique access to both expertise and infrastructure to facilitate these efforts. Particular areas …