Search

DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … Nature Biotechnology, titled ‘A genomic catalog of Earth’s microbiomes’ . (Citation: Nayfach S et al. A Genomic Catalog …

… … DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s … Usually, in a lot of cases, we still have to go through publications to get proteins, and their functions, and all … in collaboration with other people, lake sediments. We have microbiomes from different organisms, including the human …

The Facilities Integrating Collaborations for User Science (FICUS) call … provides customized analysis, the JGI also participates in publication of results. … Proposals for the annual FICUS … designed to collect long-term open access ecological data. Through FICUS, NEON will provide access to its biorepository …

The JGI has diverse capabilities in: DNA and RNA sequencing, Sample and library preparation, DNA synthesis and …

… bacterial, archaeal and eukaryotic microbes and viruses in environmental sequence data. We use multi-omics … coding potential to find novel functions that may impact microbiome structure and biogeochemical cycles. Research Team    … A complete publication list available at Google Scholar. Schulz, C …

… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … rich and underappreciated. And we’ve worked both with the microbiome. So, with symbiotic bacteria that live in animals … you’d like to read more about this, I highly recommend his publication last year, “The Biosynthetic Diversity of the …

… … Dan Udwary: You’re listening to the Department of Energy Joint Genome Institute’s … started during my PhD. And then I actually found out, through a connection of my supervisor, that in parallel, … we, for example, are really interested in metagenomes and microbiomes and figuring out which gene clusters are …

… back to a new session of Natural Prodcast. I’ve got two things I wanted to tell you about in this introduction. First … which includes screening methods, genome mining in cave microbiomes, and using engineered biosynthetic pathways and … notes, which you can always find at naturalprodcast.com or through the JGI website at jgi.doe.gov . There’s a lot more …

Program works to uncover the roles of small molecules in biological systems, linking them with genomic data to … of high performance plants and microbes, and understanding microbiome interactions. The  insights derived are crucial … samples — including microbes, fungi, plants and soils. Through a combination of experimental workflows and …

The IMG group owns and maintains integral components of JGI’s production workflow, … them to users via the Integrated Microbial Genomes & Microbiomes (IMG/M) system. Research Team    … The … to confidently assign species to nearly 326 genomes. Through the analysis of cliques, it has also become possible …

UDWARY: It’s been a while, but Natural Prodcast is back again for another round of episodes. If you stick around for … do the bioinformatics and to synthesize these results into publication? So there’s this really important because we … related to human health or creating vaccines, human gut microbiomes. We don’t do things related to human health. In …

… for another episode of Natural Prodcast. Right now I’m working on this the afternoon of the day I’m due to release it, … which are basically molecules that will covalently attach through a more permanent bond with their target. And so, for … up on previous Natural Prodcast episodes  here . Show Notes Publication: Suo Z et al. A Mesorhizobium japonicum quorum …