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QUAVE: So the other thing that we do on the ground with the communities themselves is really think about what are their … I think on COVID that we’re getting ready to submit for publication and have found some interesting hits for that as … that we found, indeed, that both formulations had some antimicrobial properties. But the one that was used in …

… and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … like. And so we take genes that we think are going to be similar, and we do a homology search. We compare those … of the IMG data portal , which is a larger portal for microbial genomics. IMG stands for Integrated Microbial …

Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Hello, and welcome back for Episode … genomic revolution, to me, as a natural part chemist for microbial natural product, is that I love microbial natural … opens up new doors. Yeah. Yeah, your origin sounds somewhat similar to mine. I was talking to an organic chemistry …

… the user programs at the JGI, and I’m also the head of the microbial genome program. And I’m a scientist here. And have … do the bioinformatics and to synthesize these results into publication? So there’s this really important because we … DOE Auspice Statement in any publications. And that can be found on our website as well. It’s also included in the …

… are, even if primary metabolism seems to be very similar. But how fast they switch, and then you see really– … Usually, in a lot of cases, we still have to go through publications to get proteins, and their functions, and all … what I always expected. Because we know from soil that communities change very much, that whenever it rains, then …

… like, yeah, there’s some part to the molecule that are similar, and there’s some bits that are different. And sometimes, in terms of biological activities– like antimicrobial or something– sometimes a little difference is … is a whole bunch of information that maybe never makes its publication. And these are little tips, you know, how to …

The Facilities Integrating Collaborations for User Science (FICUS) call represents a unique … provides customized analysis, the JGI also participates in publication of results. … Proposals for the annual FICUS … samples of the spatial, temporal, taxonomic (environmental, microbial, plants, invertebrate, and vertebrate), and …

… the National Institutes of Health and the National Science Foundation to create international partnerships in … to try and create an open source database of all known microbial natural products. So if you think about natural … whether or not gene clusters which don’t look that similar actually produce similar products. So I think we …

… parameters driving virus:host dynamics in environmental microbial communities. This involves both experimental and … abundant ocean viruses.  Nature . 537:689-93. … Selected Publications … For further information contact the Group …

… outreach program to get kids interested in microbiology and microbial chemistry. All good stuff, and I hope you enjoy … analysis where we look for other receptors with sequence similarity to some of these known ones. What's really … as what we initiated our search around. And so we found examples of those, and then looked for NRPSs nearby, …

… understanding of our role in advancing the energy and environmental genomics research frontier.  Learn more about the … 2014. … Modeled on the JGI-UC Merced internship program, a similar collaboration with AAMU was launched in 2024.  … The … (SRI) at UC Berkeley is a program designed to foster a profound understanding of research methodologies within the …

… went on to advance basic science by sequencing scores of microbial species as well as several model organisms and … of microbial and fungal metabolism necessary to design communities, new strains, or enzymes to convert plant … and Environmental Research program mission can be found at  http://science.energy.gov/ber/ . … The United …