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… focuses on using cutting-edge sequencing, annotation and analysis techniques to explore the vast and diverse world of microbes. Studying bacteria and archaea, including those … single cell approaches. This includes linking strain-level genetic variation to ecological niche adaptations.  Single …

… for researchers to request the capabilities and expertise of multiple DOE National User Facilities in one research … accepted proposals, sequencing, synthesis, metabolomics and analysis will be paid for by the Department of Energy’s … provides customized analysis, the JGI also participates in publication of results. … Proposals for the annual FICUS …

… … DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast– a … So we had a series of criteria to say this is a bunch of genetic material that exists in one copy, and it is … of natural product biosynthesis in bacteria ” The ActDES publication came out after we talked. It looks like a great …

The Fungal & Algal Program explores the vast diversity of fungi and algae to unlock their potential for bioenergy, … cutting-edge sequencing technologies and advanced genomic analysis to explore the rich diversity of fungi and algae. … on large-scale sequencing efforts that survey the vast phylogenetic and ecological diversity of fungi and algae, …

… to more easily integrate the expertise and capabilities of multiple Department of Energy Office of Science National … accepted proposals, sequencing, synthesis, metabolomics and analysis will be paid for by the Department of Energy’s … provides customized analysis, the JGI also participates in publication of results. … All proposals undergo technical …

ALISON TAKEMURA: I know that it’s looking in the genome for genetic elements of interest, you know, something like … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … would have really done a somewhat exhaustive chemical analysis of a bacterium that they’re interested in, usually …

The IMG group owns and maintains integral components of JGI’s production workflow, and is responsible for the annotation and analysis of (meta)genomic, (meta)transcriptomic, and … and ANI values, we were able to ascertain mis-assignment of species names in genomes spanning nearly 18% of all existing …

The JGI’s DNA Synthesis Program supports a wide range of projects, from single-gene synthesis to the synthesis of … the program enables the design and synthesis of complex genetic pathways and biosystems. It The program fosters … IMG/M system serves as a community resource for comparative analysis and annotation of all publicly available genomes …

… here today, and we wanted to talk to her about a whole list of things. So we have a Scripps background shared together, … natural products chemist, and you can use different solvents, and you can use different ionizations, and you can … is a whole bunch of information that maybe never makes its publication. And these are little tips, you know, how to …

… … DAN: Hey, everybody. Welcome back for another episode of Natural Prodcast. Right now I’m working on this the … And I really dove into microbial physiology and microbial genetics, and really away from chemistry and synthesizing … up on previous Natural Prodcast episodes  here . Show Notes Publication: Suo Z et al. A Mesorhizobium japonicum quorum …

The JGI Project Management Office carries out a number of activities to facilitate … has completed, your Project Manager will initiate analysis with the appropriate JGI analysis team. During this … access your data, share with collaborators, and coordinate publication with JGI scientists. Synthetic DNA constructs …