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FICUS
… The Facilities Integrating Collaborations for User Science (FICUS) call … request the capabilities and expertise of multiple DOE National User Facilities in one research proposal.  Successful … provides customized analysis, the JGI also participates in publication of results. …
Learn more
Environmental Genomics Group
… Research in the Eloe-Fadrosh group focuses on using genome-resolved … of metagenomes for signatures of viruses and novel microbial lineages, and reconstruct metabolic properties … Our research focuses on the assembly of metagenomic sequence data into microbial … monitoring, bioremediation, and the discovery of novel enzymes and bioactive compounds. …
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Natural Prodcast Episode 20: Brian Bachmann
… DAN UDWARY: Hey everyone and welcome back to a new session of Natural Prodcast. … come, though, too when you start talking about going after single gene clusters. BRIAN BACHMANN: That’s right. JACKIE … mammalian systems. But it allows us to assay on a single cell level against cell lines and against primary cells …
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Natural Prodcast Episode 23: Aaron Puri
… another episode of Natural Prodcast. Right now I’m working on this the afternoon of the day I’m due to release it, … predict or just understand better the language of microbial cell-cell communication. And he told us about his work in … and they were able to synthesize the genes for every single one of those and put them in individual plasmids and …
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Microbiome Data Science Team
… Biology is currently experiencing a revolution brought on by rapid developments in genomics and other omics … The research efforts of the group have concentrated in demonstrating the power of data science in … types) (Nature Communications 2017, Science 2018, Molecular Cell 2019) and massive reconstruction of genomes from …
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Natural Prodcast Episode 18: A CSP Primer
… round of episodes. If you stick around for the next few months, you’re going to hear my last interview with my … for example, metatranscriptome sequencing, metagenomics, single cell genomics. We even do the flow cytometry for … do the bioinformatics and to synthesize these results into publication? So there’s this really important because we …
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Natural Prodcast Episode 15: Katherine Duncan
… Dan Udwary: Hey, Alison Takemura: Hey, Dan. Dan Udwary: Today we’re going to talk … both of those things have still very much done to be excellently. Dan Udwary: For sure. Kate Duncan: Not that … is a whole bunch of information that maybe never makes its publication. And these are little tips, you know, how to …
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On Single-Cell Enzyme Assays in Marine Microbial Ecology and Biogeochemistry
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Products
… The JGI has diverse capabilities in: DNA and RNA sequencing, Sample and library preparation, Biodesign and pathway engineering Mass spectrometry … a table of standard product offerings, including a description of the product and deliverables as well as target cycle …
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Natural Prodcast Episode 10: A Primer on Genome Mining
… about natural products and the science and scientists of secondary metabolism. Welcome back for our second season of … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … ago. Non-ribosomal peptides, remember, are big, complicated enzyme systems that really just exist to pull an amino acid …
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Natural Prodcast Episode 13: Francisco Barona Goméz
… about natural products and the science and scientists of secondary metabolism. Hey everybody, this is Dan with episode … will be very flexible. They will allow promiscuity and the enzymes are driving the production of these compounds, … for example, in terms of the stereochemistry, such that single changes can lead to a particular high activity …
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Natural Prodcast Episode 7: Ben Shen
… Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Hello, and welcome back for Episode … is always associated with toxicity, basically, killing cells. ALISON: Right, because they’re so reactive. BEN: … DAN: Yeah, I don’t think your lab is gonna tackle that single handedly, right? So, yeah, getting the community …
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