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… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s … faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … with some of the latest developments in microbial genomics, metagenomics, and computational biology, and to …

… and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … machine learning really would help distinguish and predict novel gene clusters. DAN UDWARY: Yeah, it certainly could. You can imagine lots of different approaches to sort of tackling this kind of a problem that …

Program works to uncover the roles of small molecules in biological systems, linking them with genomic data to … genomics with metabolomics fuels the discovery  of novel metabolites, genes, and proteins. It also enables … including state-of-the-art instrumentation and informatic approaches.By bridging genomics with metabolomics, the …

… of the JGI’s Genomic Technologies department is   ensuring users have access to cutting-edge capabilities to help … the JGI to focus on expanding molecular capabilities and functional genomics, scaling capacity through end-to-end … automation, and further advancing sequence applications, single cell genomics, DNA synthesis, and metabolomics.   … …

… functional genomics. And there’s a lot of sequencing based approaches, of course, now that we can use to figure that … help the Society grow. And so I’ve been the chair of the publications committee for the last, what is it now, five … secondary metabolism analysis and research as a driver for novel technologies that can serve all JGI users. Nigel has a …

… of natural products, Professor Bill Fenical from Scripps Institution of Oceanography in San Diego. Bill is a pioneer … an exploration into the secondary metabolism of some more novel marine bacteria. You know, I first met Bill as a … I think you’re right. I mean, that too was an issue. What function, what utility, what kind of applications might …

… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … to kill cells. So it’s really remarkable in terms of a novel mechanism, how a small molecule can kill. So that … more nimble and they’re more innovative and so curiosity driven. So the product is not – well, it is our ultimate …

… back to a new session of Natural Prodcast. I’ve got two things I wanted to tell you about in this introduction. First … an interesting question. We’ve used a lot of different approaches. Some of them have been actinomycete-specific … in order to put them together to build pathways, to make novel compounds, or to find analogs. And that was Warp …

Synthesis Program supports a wide range of projects, from single-gene synthesis to the synthesis of entire chromosomes, … optimize genetic systems. By enabling these cutting-edge approaches, the program supports transformative research to … relationships as well as insights into clade-specific novelties and expansions.  … ICE is an open source registry …

The mission of the Joint Genome Institute is to serve the scientific community as a user facility pioneering functional genomics to solve the most relevant bioenergy and … more customized analysis, the JGI also participates in publication of results. … Submission … More on Sequencing …

… for another episode of Natural Prodcast. Right now I’m working on this the afternoon of the day I’m due to release it, … to identify what’s being made. In some cases it might be novel, in some cases it might be– might be a known structure … up on previous Natural Prodcast episodes  here . Show Notes Publication: Suo Z et al. A Mesorhizobium japonicum quorum …

… fantastic diversity of cell types and associated organisms, including fungal and bacterial symbionts, detrimental … (PGPR) Pseudomonas simiae WCS417. One suggested function of these phage genes is the modulation of their … of plant/environmental responses … Selected Publications … Research Team Alumni … For further details, …