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Microbiome Data Science Team
… a revolution brought on by rapid developments in genomics and other omics technologies.  The exponential growth of DNA … data, coupled with recent computational technology advances in management, processing and visualization of “big data,” and … Molecular Cell 2019) and massive reconstruction of genomes from uncultivated microbes (Nature 2019). Other projects in …
Learn more
JGI-TMF Critical Minerals and Materials Call
… The joint Critical Minerals and Materials call represents a unique opportunity … provides customized analysis, the JGI also participates in publication of results. Go here for additionial information, … The ranked proposal list, along with a recommendation from management at the JGI and the other participating …
Learn more
Natural Prodcast Episode 11: Marnix Medema
… Dan Udwary: You’re listening to the Department of Energy … we get to present our conversation with Marnix Medema , from Wageningen University in the Netherlands. Marnix is … this, especially Christmas time when NAR, the Nucleic Acids Research that’s a journal that– Dan Udwary: Yeah. …
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Who We Are
… National Laboratory. The JGI consists of 225 researchers and support staff in the Integrative Genomics Building in … California.  Our location at the IGB fosters team science and collaboration with partner organizations such as the DOE Systems Biology Knowledgebase and …
Learn more
Natural Prodcast Episode 7: Ben Shen
… DAN: You’re listening to the US Department of Energy Joint … This time, we’ve got a great interview with Ben Shen, from the Scripps Research Institute in Jupiter Florida. This … natural product-producing organisms that Pfizer, you know, mined for years to try to find new active compounds. And we …
Learn more
FICUS
… opportunity for researchers to request the capabilities and expertise of multiple DOE National User Facilities in … proposals within the focused topic areas that can be completed on an accelerated timeline as compared with … provides customized analysis, the JGI also participates in publication of results. …
Learn more
Institutional User Agreements
… approved proposal starts with a User Agreement — before any work can begin, including the submission of samples for … rights in technical data, project reporting to the DOE, and publication requirements. An official with authority is … and delays on the work. The transfer of a proposal from one commercial institution to a new commercial …
Learn more
Natural Prodcast Episode 4: Nancy Keller
… DAN: You’re listening to the US Department of Energy Joint … DAN: Welcome back to Natural Prodcast! This is episode 4! From here on out, for a while, we’re going to be presenting … a bunch of microbes, all talking to each other in every environment you can think about.   DAN: What kind of genomic …
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Natural Prodcast Episode 2: The Primer, Part 2
… DAN: You’re listening to the US Department of Energy Joint … is a bacterial sacred metabolite, and ergot alkaloids come from fungi, and Taxol from plants. Plants, fungi, bacteria, … there. And then, you know, they will have to create an environment that’s good for them to grow in. They might have …
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Natural Prodcast Episode 15: Katherine Duncan
… studied chemistry, because she switched her degree program from geography to chemistry. So we were both enrolled as … actinomycetes form spores and can reside in really tough environments kind of adds a fascination from a biological point … is a whole bunch of information that maybe never makes its publication. And these are little tips, you know, how to …
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Natural Prodcast Episode 6: Marc Chevrette
… in the project by watching Amanda Hurley’s presentation from the 2019 JGI Genomics of Energy & Environment Meeting.] He’s also a really good friend of mine. I … have against pathogens from the clinic. At that point, isolates get shipped to us in Wisconsin, and we try and use …
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Natural Prodcast Episode 5: Brad Moore
… DAN: You’re listening to the US Department of Energy Joint … the University of Hawaii and moved there in the early ’60s from Berkeley to work on this new budding field of marine … of the most notorious toxins there are in the marine environment. And it was that year that the Pacific Northwest …
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