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Single Cell Research Group
… in 1985, which highlights our skewed understanding of microbial metabolism towards a minority of cultivated bacteria, still … … Research Interests … Former Lab Members … Selected Publications … For further details, please reach out to the …
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Natural Prodcast Episode 23: Aaron Puri
… to predict or just understand better the language of microbial cell-cell communication. And he told us about his … organisms? What’s its name? And what kind of secondary metabolism has it got? AARON PURI: Yeah. OK. So I think that … up on previous Natural Prodcast episodes  here . Show Notes Publication: Suo Z et al. A Mesorhizobium japonicum quorum …
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FICUS
… for researchers to request the capabilities and expertise of multiple DOE National User Facilities in one research … provides customized analysis, the JGI also participates in publication of results. … Proposals for the annual FICUS … samples of the spatial, temporal, taxonomic (environmental, microbial, plants, invertebrate, and vertebrate), and …
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Products
RNA sequencing, Sample and library preparation, DNA synthesis and pathway engineering Mass spectrometry based … physical separation of a biologically relevant unit from a microbial community, such as a microcolony, microbial … ( IMG ), methylation analysis 131/176 Microbial Single Particle Sort Draft quality assembly of amplified genomes …
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Natural Prodcast Episode 10: A Primer on Genome Mining
… products and the science and scientists of secondary metabolism. Welcome back for our second season of Natural … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … of the IMG data portal , which is a larger portal for microbial genomics. IMG stands for Integrated Microbial …
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Natural Prodcast Episode 13: Francisco Barona Goméz
… products and the science and scientists of secondary metabolism. Hey everybody, this is Dan with episode 13 of … UGA-Langebio in Irapuato, Mexico. His interests are in microbial diversity and evolution, particularly as how … of natural product biosynthesis in bacteria ” The ActDES publication came out after we talked. It looks like a great …
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Secondary Metabolites Program
… fundamental growth, provide critical advantages to the organisms producing them, and are often involved in defense, … products and the science and scientists of secondary metabolism. As the JGI acts on its goals in — and builds out … current and future developments, and how the JGI can be part of that space. … Secondary Metabolism Collaboratory … …
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Thawing permafrost, microbes, and viruses: Gary Trubl — Part 2
Gary Trubl, a virologist and postdoc at Lawrence Livermore National Laboratory, … and isotopes to track how viruses influence the flow of carbon in permafrost.  …
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Natural Prodcast Episode 18: A CSP Primer
… all of these programs can and often do involve secondary metabolism. JGI’s mission is broadly focused on biological … the user programs at the JGI, and I’m also the head of the microbial genome program. And I’m a scientist here. And have … do the bioinformatics and to synthesize these results into publication? So there’s this really important because we …
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Plant Program
… carbon, detoxifying soils, interacting with other organisms, and adapting to environmental changes. The program … development of complex biomolecules — which can include antimicrobial and anti-pest compounds.  The program is working … the ability to discover syntenic orthologs, generate publication quality graphics and explore pangenome views of …
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DNA Synthesis Program
The JGI’s DNA Synthesis Program supports a wide range of projects, from … of construct design, building, and characterization. In partnership with the Joint BioEnergy Institute (JBEI), we … … Synthesis Capabilities & Offerings … BOOST … Integrated Microbial Genomes and Microbiomes … Mycocosm … Phytozome … …
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Thawing permafrost, microbes, and viruses: Gary Trubl — Part 1
Gary Trubl, a virologist at Lawrence Livermore National Laboratory, wants to understand how viruses impact the release of greenhouse gases from Arctic permafrost. But to see what they’re doing, he first needs …
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