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Plant-Microbial Interactions Group
… single-cell and spatial transcriptomics barcode-based genetics (RB-TnSeq), and computational genomics to better … experimental characterization methods, in addition to bioinformatics tools to elucidate phage function in this … of plant/environmental responses … Selected Publications … Research Team Alumni … For further details, …
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Calculating the Costs of Multiple Switchgrass Gene Copies
… led by researchers at the University of Texas (UT) at Austin, the HudsonAlpha Institute for Biotechnology (HudsonAlpha), and the U.S. Department of … of switchgrass and is a key component in providing genetic variation available for selection to improve biofuel …
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Natural Prodcast Episode 20: Brian Bachmann
I wanted to tell you about in this introduction. First and foremost, our interview this week is with Professor Brian … research in Utah touches on many areas of natural products biosynthesis and drug discovery. If you enjoy the interview, … It was unpublished at that point. But people would push out gene clusters maybe once a month at most. Maybe twice a …
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FICUS
The Facilities Integrating Collaborations for User Science (FICUS) call represents a unique … the capabilities across at least two of the facilities, and generate datasets beyond what each of these facilities could … provides customized analysis, the JGI also participates in publication of results. … Proposals for the annual FICUS …
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Examples: Successful LOIs & Submissions
PIs who drafted them.  … Elucidating Sphagnum microbiome genetic interactions for improved growth at elevated … shifts of plant-fungal symbionts … Elucidation of the gene regulatory networks governing terpenoid-mediated plant environment …
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Natural Prodcast Episode 10: A Primer on Genome Mining
… and scientists of secondary metabolism. Welcome back for our second season of Natural Prodcast. This first … ALISON TAKEMURA: I know that it’s looking in the genome for genetic elements of interest, you know, something like … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, …
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Biosynthesis and Emission of Stress-Induced Volatile Terpenes in Roots and Leaves of Switchgrass (Panicum virgatum L.)
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Natural Variation in Lignin and Pectin Biosynthesis-Related Genes in Switchgrass (Panicum virgatum L.) and Association of SNP Variants with Dry Matter Traits
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Cytochrome P450‐catalyzed biosynthesis of furanoditerpenoids in the bioenergy crop switchgrass (Panicum virgatum L.)
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Natural Prodcast Episode 24: Jackie Winter and SMC
Doering and Bryce Foster and too many others to name at JGI for the last two years or so. SMC is now released and ready … bit more into fungi and learning the differences of all the genetic differences and then expanded on on that knowledge … And I think a lot of times, too, when we even look at publications, it’s always positive data, right? No one ever …
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Mission
… and resources. Our vision is to lead genomic innovation for a sustainable bioeconomy. ALL PROPOSALS must support the … microbes and microbial communities that can break down the lignin and cellulose in plant walls; and organisms that can … are at the core of many environmental processes, and the genetic makeup of microbial species and communities forms …
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Natural variation in genes potentially involved in plant architecture and adaptation in switchgrass (Panicum virgatum L.)
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