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Natural Prodcast Episode 10: A Primer on Genome Mining
… and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … 70:3 ALISON TAKEMURA: And so did you succeed in finding your vein of gold with aflatoxin? DAN UDWARY: Oh, yeah. … of the problem, and then how machine learning, because it feeds on so much data, right, to learn features of interest. …
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Natural Prodcast Episode 11: Marnix Medema
… early this summer, then it was– well, I think the day your visit was planned was just a few days before the due … I needed more people to work on things, and to actually do some chemistry. And a few months after I submitted one of … the quantity is up to standard, and maybe it gives you some feedback as a developer. And then when it’s, well, when the …
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Natural Prodcast Episode 13: Francisco Barona Goméz
… Barona-Goméz, or Paco, as he prefers to be known among friends in natural products. He’s from Langebio in Irapuato, … that you know what to look for. Right? And so I think your approach is really cool because you can find things … got the podcast. If you have a question, or want to give us feedback, tweet us @JGI or to me @danudwary. That’s D-A-N …
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Publications
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Partnerships: Adopt-A-Genome
… “Adopt a Genome” is an informal program for faculty to “claim” … faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … genome scientists and recruit new talent for biosciences.  Adopt-a-Genome has: ~20 faculty from institutions across the …
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Natural Prodcast Episode 12: Nadine Ziemert
… doing this from home. And my own podcasting setup– and yours, too, Dan. DAN UDWARY: Yeah, you’re looking very … Usually, in a lot of cases, we still have to go through publications to get proteins, and their functions, and all … got the podcast. If you have a question or want to give us feedback, tweet us at JGI or to me at Dan Udwary. That’s …
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Natural Prodcast Episode 8: Eric Schmidt
… Post-translationally modified Peptides.” You’ll have to use your imagination a little bit to really make that make sense … them and squeeze them, then you can use them to squirt your friends. But they’re actually beautiful. Sorry about that! … in their environment and eating them. They’re filter feeders that have a really important role on the reef and …
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Natural Prodcast Episode 23: Aaron Puri
… to see if I’m going to slip a day on releasing it into the feeds, but I’m trying, you guys. Schedules are hard. But, … enjoy our talk with Aaron Puri. DAN: Jackie, we have one of your colleagues here today! JACKIE: We do. It is very … who’s a Co-PI on a JGI project Amy Schaefer . So we’ve been friends ever since. She’s a senior scientist who works with …
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Who We Are
…   The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a national user … and collaboration with partner organizations such as the DOE Systems Biology Knowledgebase and the National Microbiome Data Collective.    … The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a high-throughput …
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Natural Prodcast Episode 1: The Primer, Part 1
… of Energy Joint Genome Institute, or JGI. JGI is a DOE Office of Science User Facility located at Lawrence … fungi and bacteria, basically all living things. When your crazy Aunt is posting on Facebook about cinnamon or … got the podcast. If you have a question, or want to give us feedback, tweet us @JGI, or to me @danudwary. If you want to …
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Natural Prodcast Episode 22: Alison Narayan
… and exploiting biocatalysts – that is, using enzymes to do chemical reactions. Obviously, in my work, in genome … department. So welcome, Alison to today’s podcast. And with your background, this is pretty fun. We’ve been talking with … account? Or do you and your lab focus mainly on what can we feed this and what can it actually turn over? ALISON …
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Metagenome Program
… to uncover the complex interactions and functions that shape ecosystems. By decoding the microbial DNA in natural … of biogeochemically-relevant pathways, enabling modeling of microbiomes based on functional traits. These advancements … activity, transcription regulation, and noncoding RNAs in microbiomes. The insights from this work have the potential …
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