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Natural Prodcast Episode 10: A Primer on Genome Mining
… DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … do some sort of slightly novel chemistry. That’s just how evolution works. So if secondary metabolism is really …
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New Lineages of Life Group
… research is focused on the discovery and characterization of novel bacterial, archaeal and eukaryotic microbes and … to identify new divergent lineages and expand the Tree of Life. We then investigate the coding potential to find … which challenge our understanding of viral complexity and evolution Our research focuses on discovering and …
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Plant Program
… to current problems facing humanity. A major focus are biofuel feedstock species and plant-microbe interactions, … a plant based bioeconomy where plants are a major source of chemical production and contribute to a healthier planet … types to explore the molecular mechanisms behind phenotypic evolution. It also utilizes advanced tools, including deep …
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Natural Prodcast Episode 7: Ben Shen
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … among many, many major discoveries since the genomic revolution, to me, as a natural part chemist for microbial … natural products of microbial origin is around 30,000 from fungal, and a 40,000 from bacteria. Okay? And among the …
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FICUS
… for researchers to request the capabilities and expertise of multiple DOE National User Facilities in one research … Successful applications will focus on high-risk/high-payoff proposals within the focused topic areas that can be … provides customized analysis, the JGI also participates in publication of results. …
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Natural Prodcast Episode 18: A CSP Primer
… while, but Natural Prodcast is back again for another round of episodes. If you stick around for the next few months, … so much of a focus within BER anymore. We really focus on terrestrial ecosystems, but we work in coastal environments, … do the bioinformatics and to synthesize these results into publication? So there’s this really important because we …
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Single Cell Research Group
… Research in the Woyke laboratory focuses on the utility of single-cell methods to access genetic material of uncultivated taxa of interest. One such effort is targeted at environmental … gap is also reflected in the strongly biased representation of sequenced genomes in the public domain, the bulk of which …
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Natural Prodcast Episode 12: Nadine Ziemert
… DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … And I found her review in natural product reports on the evolution of genome mining and microbes with Mohammad … Usually, in a lot of cases, we still have to go through publications to get proteins, and their functions, and all …
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Natural Prodcast Episode 20: Brian Bachmann
… DAN UDWARY: Hey everyone and welcome back to a new session of Natural Prodcast. I’ve got two things I wanted to tell … and floods them on a regular basis. So they are full of terrestrial microbes. So they’re open ecosystems. They’re … school, then Frances Arnold’s papers came out, directed evolution, and Pim Stemmer. And at the time, I thought that …
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Institutional User Agreements
… — before any work can begin, including the submission of samples for sequencing, or the submission of sequencing … rights in technical data, project reporting to the DOE, and publication requirements. An official with authority is … with an active JGI User Agreement older than January 2024 will be required to execute a 2024 version .  The …
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Metabolomics Program
… The JGI’s Metabolomics Program works to uncover the roles of small molecules in biological systems, linking them with genomic data to enhance our understanding of genome science, organisms, and ecosystems at the … research related to soil nutrient cycling and health, terrestrial biogeochemical processes, development of high …
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Natural Prodcast Episode 19: Bill Fenical
… for you here today. We got the opportunity to talk to one of the real legends of natural products, Professor Bill … in a way that’s similar or analogous to what’s going on in terrestrial systems with plants making toxins and so on and … Wow. It’s all happened so fast. I mean, in terms of human evolution and knowledge, like discovering that the ocean is …
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