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The Facilities Integrating Collaborations for User Science … provides customized analysis, the JGI also participates in publication of results. … Proposals for the annual FICUS … for Structural Molecular Biology . … Accessing NEON’s Environmental Sample Archives, Applying JGI and EMSL Omics …

… faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … with some of the latest developments in microbial genomics, metagenomics, and computational biology, and to … genomes (MAGs), and 40,000+ metagenomes along with curated environmental- and other metadata to enable comprehensive …

The Fungal & Algal Program explores the vast diversity of fungi and algae to unlock their potential for bioenergy, environmental sustainability, and bioproducts. By sequencing … into bioenergy and bioproducts. The program’s fungal genomics research explores new metabolic processes and …

… bacterial, archaeal and eukaryotic microbes and viruses in environmental sequence data. We use multi-omics (metagenomics, metatranscriptomics, single cell genomics and … and biogeochemical cycles. Research Team    … A complete publication list available at Google Scholar. Schulz, C …

… are influenced by microbial partners. We use a variety of genomics-powered tools to study this complexity, including … ATAC-seq, and spatial transcriptomics to profile the plant/environmental interface. We are using these methods to … of plant/environmental responses … Selected Publications … Research Team Alumni … For further details, …

The IMG group owns and maintains integral components of JGI’s production … and ANI values, we were able to ascertain mis-assignment of species names in genomes spanning nearly 18% of all existing … ANI is used to ascertain the species specificity of single cells and genomes extracted from metagenomes, and …

I think the important thing to remember is that, thanks to genomics, we now know that it is very hard to find stuff … they don’t tend to be exposed to many dramatic changes, environmentally speaking. It’s hard to imagine that there … of natural product biosynthesis in bacteria ” The ActDES publication came out after we talked. It looks like a great …

… … Dan Udwary: You’re listening to the Department of Energy … family would be a set of gene clusters across different species, which all encode the production of either the same … of hooks into IMG’s data. IMG being Integrated Microbial Genomics at JGI, a large data set of bacterial genomes. And …

… … DAN: Hey Marcy!  ALISON: Hey Marcy?  MARCY: Hello. How’s it … And we’ve done some work with those and have a couple of publications out there on the chemistry. There’s so much … would see it produce if it were under the stressors and the environmental interactions that it has in the environment. …

… … DAN: Hey, everybody. Welcome back for another episode of … and they were able to synthesize the genes for every single one of those and put them in individual plasmids and … up on previous Natural Prodcast episodes  here . Show Notes Publication: Suo Z et al. A Mesorhizobium japonicum quorum …