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Plant Program
… With collaborative user projects, the JGI’s Plant Program delves into the natural world’s potential to … to current problems facing humanity. A major focus are biofuel feedstock species and plant-microbe interactions, … The Plant Program advances our understanding of plants’ biological and ecological roles to foster …
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Biodesign
… assessments. This is done by synthesizing genes, pathways, and whole chromosomes for bioenergy, nutrient cycling and … automations for DNA design, assembly and analysis Overview of biodesign products The JGI Biodesign platform enables … length  Pooled libraries such as sgRNA, promoter or MoClo assemblies …
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Elviz – exploration of metagenome assemblies with an interactive visualization tool
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Fungal & Algal Program
… The Fungal & Algal Program explores the vast diversity of fungi and algae to unlock their potential for bioenergy, … and bioproducts. By sequencing and analyzing the genomes of these organisms, the program investigates the biological … and advanced genomic analysis to explore the rich diversity of fungi and algae. These organisms play a critical role in …
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New Lineages of Life Group
… Our research is focused on the discovery and characterization of novel bacterial, archaeal and eukaryotic microbes and … to identify new divergent lineages and expand the Tree of Life. We then investigate the coding potential to find … Exploring the fascinating world of giant viruses, which challenge our understanding of viral …
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DNA Synthesis Program
… The JGI’s DNA Synthesis Program supports a wide range of projects, from single-gene synthesis to the … been a pioneering effort in functional genomics since 2012, with a focus on addressing critical energy and environmental … project. These advancements contribute to the development of new biofuels and sustainable biochemicals. The DNA …
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Natural Prodcast Episode 24: Jackie Winter and SMC
… Hey, everyone! Welcome to the “Self Promotion Episode” of Natural Prodcast. A little bit of a bonus episode, since … the rest of the archaea and fungal genomes and then work on metagenomes. So yeah. So we’ve taken every public sequence … And I think a lot of times, too, when we even look at publications, it’s always positive data, right? No one ever …
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Strain Engineering
… The focus of this group, in recent years, has been to bring … technologies to bacteria, yeasts and algae previously with little to no genetic tools enabling heterologous expression and functional exploration.  The developed strains represent an additional …
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FICUS
… for researchers to request the capabilities and expertise of multiple DOE National User Facilities in one research … applications will focus on high-risk/high-payoff proposals within the focused topic areas that can be completed on an … provides customized analysis, the JGI also participates in publication of results. …
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Natural Prodcast Episode 10: A Primer on Genome Mining
… DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … and archaeal genomes that were created – these are Metagenome Associated Genomes, or MAGs. So these are genomes …
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Data Ecosystem
… The JGI is leveraging its current partnerships to offer new capabilities and resources to users through a BER … present exciting possibilities for scientific exploration, granting access to diverse datasets that deepen our understanding of how organisms interact with each other and with their environment and help unravel …
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Products
… The JGI has diverse capabilities in: DNA and RNA sequencing, Sample and library preparation, … Mass spectrometry based metabolomics Below is a table of standard product offerings, including a description of the product and … assembled to less than 5kb in length, cloned into vector of choice Glycerol stock of sequence verified clone 102/NA …
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