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… The JGI has diverse capabilities in: DNA and RNA sequencing, Sample and library preparation, … Mass spectrometry based metabolomics Below is a table of standard product offerings, including a description of … sequencing products below. In addition, JGI will submit raw sequence data to  SRA at NCBI once the standard analysis is …

… Biology is currently experiencing a revolution brought on by … and other omics technologies.  The exponential growth of DNA sequencing data, coupled with recent computational … the power of data science in tackling grand challenges in Biology, with a special focus on microbiome research.  These …

… The DNA Synthesis Science User Advisory Committee is chartered … on the effective management and strategic objectives of the programs. The Committee serves as the Program's key external advisory panel and advocates of Program strategy, operations, and scientific relevance …

… research is focused on the discovery and characterization of novel bacterial, archaeal and eukaryotic microbes and viruses in environmental sequence data. We use multi-omics (metagenomics, … to identify new divergent lineages and expand the Tree of Life. We then investigate the coding potential to find …

… Data produced and released by the US Department of Energy (DOE) Joint Genome Institute (JGI) are subject to … the need to have a limited and time-sensitive protection of certain types of data to support their use by those generating data. The … PIs or co-PIs) who wish to include use-restricted data in publications, or who wish to redistribute data in any way …

… more than 50,000 genomes that we derived from meta-genome sequences. As always, you’ll find transcripts and show notes … wise maybe, what genome mining is, then, is looking at DNA sequence and trying to find the things that you want to … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, …

… provided by JGI and the JGI user community below for DNA preparation tools, high molecular-weight DNA extraction and RNA preparation.  JGI sample QC protocols can be found here . DNA Extraction Protocols: … Tips for High Molecular Weight DNA extraction: …

… which was a very early genome mining company, back when DNA sequencing of natural product pathways was hard and … Yeah, I went to a SIMB meeting, Society for Industrial Microbiology meeting and– DAN UDWARY: Which is where we are … And at the time, it was really exciting when people would sequence [DNA]. The genome was– well, that hadn’t really …

… And we’ve done some work with those and have a couple of publications out there on the chemistry. There’s so much … local environments, and so they don’t transfer a lot of DNA back and forth, especially across species. And so then … with any kind of gene cluster identification, doing it with sequence alone you have to have some kind of a template to …

… Usually, in a lot of cases, we still have to go through publications to get proteins, and their functions, and all … it would work, but we actually found fosmids. And we sequenced the whole fosmid at the time with Sanger … to hear from you. We have projects in genome sequencing, DNA synthesis, transcriptomics, metabolomics, and natural …

… The mission of the Joint Genome Institute is to serve the scientific … computing (HPC) and data analysis.  The DOE Systems Biology Knowledgebase ( KBase ) integrates systems biology data and tools to help predict biological … as needed), and the work plan is written into a Statement of Work document. …