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… more than 50,000 genomes that we derived from meta-genome sequences. As always, you’ll find transcripts and show notes … wise maybe, what genome mining is, then, is looking at DNA sequence and trying to find the things that you want to … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, …

… and other omics technologies.  The exponential growth of DNA sequencing data, coupled with recent computational … al. (2017) Protein structure determination using metagenome sequence data. Science   355(6322):294-298 Paez-Espino D. et … Science 344(6186):909-13 … Research Efforts … Selected Publications … For further details, please reach out to the …

The User Support Analysis group provides computational analysis for new … epigenomics. Our work varies in scope from the development of highly customized analysis workflows for new product …

… focuses on using cutting-edge sequencing, annotation and analysis techniques to explore the vast and diverse world of microbes. Studying bacteria and archaea, including those … resequencing, RNA sequencing and epigenomics. Expansion of sequence space:  The JGI generates reference genomes from …

… … DAN: You’re listening to the US. .Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … at genomes and seeing where the really hard things to sequence were, and wondering what those … what those were … at the Broad that was looking to develop new methods for DNA sequencing of microbes. And what kept breaking our …

The Joint Genome Institute's DNA Synthesis Platform capabilities support researchers exploring how to convert sequence into functional assessments. This is done by … and novel automations for DNA design, assembly and analysis Overview of synthesis products The JGI DNA …

Usually, in a lot of cases, we still have to go through publications to get proteins, and their functions, and all … it would work, but we actually found fosmids. And we sequenced the whole fosmid at the time with Sanger … to hear from you. We have projects in genome sequencing, DNA synthesis, transcriptomics, metabolomics, and natural …

Find protocols provided by JGI and the JGI user community below for DNA preparation tools, high molecular-weight DNA extraction …

The Sequencing Technologies Group applies cutting edge molecular capabilities and state-of-the-art next-generation sequencing to enable …

Glavina del Rio , Danielle Graham , or Miranda Harmon-Smith DNA Synthesis projects: Miranda Harmon-Smith Metabolomics … for individuals associated with your proposal. Find our Publications Policy on our Data Policy & Support page.    … … I request a culture/slant/DNA of an organism that has been sequenced at the JGI? … How do I check the current status of …

Science through high performance computing (HPC) and data analysis.  The DOE Systems Biology Knowledgebase ( KBase ) … … For sequencing projects, once work is under way, raw sequence data is released to NCBI’s Sequence Read Archive on … more customized analysis, the JGI also participates in publication of results. … Submission … More on Sequencing …

… functions that shape ecosystems. By decoding the microbial DNA in natural environments, the Program provides a snapshot … tools and visualization resources that support user analysis of biogeochemically-relevant pathways, enabling … comprising the largest public collection of plasmid sequences identified from genomes, SAGs, MAGs, metagenomes …