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… for researchers to request the capabilities and expertise of multiple DOE National User Facilities in one research … they must utilize a broad range of the capabilities across at least two of the facilities, and generate datasets … provides customized analysis, the JGI also participates in publication of results. …

… to current problems facing humanity. A major focus are biofuel feedstock species and plant-microbe interactions, … a plant based bioeconomy where plants are a major source of chemical production and contribute to a healthier planet … The Plant Program advances our understanding of plants’ biological and ecological roles to foster …

… automations for DNA design, assembly and analysis Overview of biodesign products The JGI Biodesign platform enables … up to ~150 Kb in length  Pooled libraries such as sgRNA, promoter or MoClo assemblies … BOOST provides a suite of tools to automate sequence design for assembly by Gibson, …

… uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work … experimental approaches to assess microbial activity across ecosystems.  By studying microbial communities and … drive innovations that could advance our understanding of Earth’s ecosystems. …

… joined the JGI in 2017, he brought with him 20 years of industry experience — and an opportunity to expand the JGI’s portfolio of user companies. Now the Department of Energy is uniting National Labs and industry, including … funded by an industry partner to perform a defined scope of work using the JGI’s unique facilities, equipment, and …

… DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast– a … or specialized metabolism, what we are often coming across is very complicated pathways with many, many enzymes, … we might be able to find any new genomes, new areas or regions or loci, that encode for new, truly chemical dark …

… DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … at patterns of Pfams through a genome and predict where regions of secondary metabolism should be. That’s still …

… research is focused on the discovery and characterization of novel bacterial, archaeal and eukaryotic microbes and … to identify new divergent lineages and expand the Tree of Life. We then investigate the coding potential to find … Exploring the fascinating world of giant viruses, which challenge our understanding of viral …

… here today, and we wanted to talk to her about a whole list of things. So we have a Scripps background shared together, … is a whole bunch of information that maybe never makes its publication. And these are little tips, you know, how to … tried to promote it in different countries, in different regions. And I think that’s cool. Alison Takemura: Can you …

… DAN: Hey, everybody. Welcome back for another episode of Natural Prodcast. Right now I’m working on this the afternoon of the day I’m due to release it, which is not ideal for me … me in the woods then. [LAUGHTER] JACKIE: So we’re kind of across — covered quite a few different topics. And so right …

… Research in the Woyke laboratory focuses on the utility of single-cell methods to access genetic material of uncultivated taxa of interest. One such effort is targeted at environmental … gap is also reflected in the strongly biased representation of sequenced genomes in the public domain, the bulk of which …

… Data produced and released by the US Department of Energy (DOE) Joint Genome Institute (JGI) are subject to … the need to have a limited and time-sensitive protection of certain types of data to support their use by those generating data. The … PIs or co-PIs) who wish to include use-restricted data in publications, or who wish to redistribute data in any way …