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DNA Synthesis Program
Program supports a wide range of projects, from single-gene synthesis to the synthesis of entire chromosomes, … solutions.  The program has been a pioneering effort in functional genomics since 2012, with a focus on addressing … program supports cutting-edge research in synthetic biology by synthesizing genes, pathways, and whole chromosomes for …
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Examples: Successful LOIs & Submissions
… as successful submissions to our CSP New Investigator, CSP Functional Genomics, and Facilities Integrating … PIs who drafted them.  … Elucidating Sphagnum microbiome genetic interactions for improved growth at elevated … plant-fungal symbionts … Elucidation of the gene regulatory networks governing terpenoid-mediated plant environment …
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FICUS
… the capabilities across at least two of the facilities, and generate datasets beyond what each of these facilities could generate by itself.   Accepted projects must address or be otherwise … provides customized analysis, the JGI also participates in publication of results. … Proposals for the annual FICUS …
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Natural Prodcast Episode 12: Nadine Ziemert
… around us. And we actually don’t know a lot about them by their mate, what their role in nature, how have they been … of it. So it wasn’t only chemistry or only biochemistry or genetics. It was also ecology. It was also evolution. It was … Usually, in a lot of cases, we still have to go through publications to get proteins, and their functions, and all …
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Microbiome Data Science Team
Biology is currently experiencing a revolution brought on by rapid developments in genomics and other omics … of host-virus interactions, the exploration of the functional dark matter as well as the development of novel … Science 344(6186):909-13 … Research Efforts … Selected Publications … For further details, please reach out to the …
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FICUS-NERSC/KBASE
… the scientific community as a user facility pioneering functional genomics to solve the most relevant bioenergy and … next review cycle. All proposals undergo technical review by JGI staff as well as staff at the other participating … more customized analysis, the JGI also participates in publication of results. … Submission … More on Sequencing …
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Natural Prodcast Episode 13: Francisco Barona Goméz
… by bacterial or fungal metabolism by microbes, will have a functional role. We started from that. Evolution doesn’t … the feeling, we have is that if you have in these molecular networks, nodes that are not so highly diversified, for … of natural product biosynthesis in bacteria ” The ActDES publication came out after we talked. It looks like a great …
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Community Science Program
… call is for PIs who have never led a JGI project, and the Functional Genomics call is for projects that translate … synthesis, metabolomics and analysis will be performed by the JGI at no cost to the user. … All proposals first … more customized analysis, the JGI also participates in publication of results. See more details on our Review …
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Natural Prodcast Episode 10: A Primer on Genome Mining
ALISON TAKEMURA: I know that it’s looking in the genome for genetic elements of interest, you know, something like … can just mediate so many kinds of interactions. And by understanding them, we can promote the health and … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, …
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Products
… percentile*) DNA Synthesis Constructs <5kb in size Single gene or multiple small genes assembled to less than 5kb in … ( IMG/M ), mapping 273/273 Metagenome Cell Enrichments Obtained by physical separation of a biologically relevant unit from …
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Frequently Asked Questions: Project Management
… or stocks of any organisms. These materials should be obtained by contacting the collaborator listed on the “info” … ) The following tools are available for functional annotation/curation of your genomes Microbial … for individuals associated with your proposal. Find our Publications Policy on our Data Policy & Support page.    … …
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Natural Prodcast Episode 23: Aaron Puri
… and he has a project with the JGI to synthesize the genes for and explore the chemistry of quorum sensing … introduction in natural products, so I might just start out by asking you know how did you get started. I know you’re … up on previous Natural Prodcast episodes  here . Show Notes Publication: Suo Z et al. A Mesorhizobium japonicum quorum …
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