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Natural Prodcast Episode 8: Eric Schmidt
… was one where there was a kind of a good well defined symbiosis. The compounds found in those animals were really … you’d like to read more about this, I highly recommend his publication last year, “The Biosynthetic Diversity of the … PhD mentor, the late, great D. John Faulkner. He was a giant in the field, and left behind a legacy of fantastic …
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Here, There and Everywhere: Large and Giant Viruses Abound Globally
… significantly expands the global diversity of large and giant viruses. While the microbes in a single drop of water could outnumber a small city’s …
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Natural Prodcast Episode 10: A Primer on Genome Mining
… the same sorts of things. And then, bacteria often live in symbiosis with plants and might actually be producing … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … are common homology search tools. And I would blast those against the genome that I wanted to search. And if I found a …
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Environmental Genomics Group
Research in the Eloe-Fadrosh group focuses on using genome-resolved … genomic information from uncultivated microbes and viruses. We develop computational approaches to sift through … Microbiology , 15032. 10.1038/nmicrobiol.2015.32 … Selected Publications … For further details, please reach out to the …
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Natural Prodcast Episode 6: Marc Chevrette
… … DAN: You’re listening to the US. .Department of Energy Joint Genome … project by watching Amanda Hurley’s presentation from the 2019 JGI Genomics of Energy & Environment Meeting.] He’s … microbes and seeing what kind of activity they might have against pathogens from the clinic. At that point, isolates …
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Natural Prodcast Episode 23: Aaron Puri
… for another episode of Natural Prodcast. Right now I’m working on this the afternoon of the day I’m due to release it, … was like a nice summer day in Seattle I think this was like 2013 or 2014. And antiSMASH — I know you’ve interviewed … up on previous Natural Prodcast episodes  here . Show Notes Publication: Suo Z et al. A Mesorhizobium japonicum quorum …
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Giant Bacteria Found in Guadeloupe Mangroves Challenge Traditional Concepts
… complexity At first glance, the slightly murky waters in the tube look like a scoop of stormwater, complete with … in Complex Systems (LRC) in Menlo Park, Calif. In the June 24, 2022, issue of the journal Science, Volland and … described the morphological and genomic features of this giant filamentous bacterium, along with its life cycle. For …
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Data Policy
… and released by the US Department of Energy (DOE) Joint Genome Institute (JGI) are subject to the following Data … this policy) produced through all user projects accepted FY22 and later through the Community Science Program (CSP), … PIs or co-PIs) who wish to include use-restricted data in publications, or who wish to redistribute data in any way …
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A layered defense against plant pathogens
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FICUS
The Facilities Integrating Collaborations for User Science (FICUS) call … provides customized analysis, the JGI also participates in publication of results. … Proposals for the annual FICUS … available from all the facilities participating in the FY25 call, introduces the resources available from the …
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FICUS Overview
The Facilities Integrating Collaborations for User Science (FICUS) initiative was established in 2014 to encourage and enable researchers to more easily … provides customized analysis, the JGI also participates in publication of results. … All proposals undergo technical …
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Natural Prodcast Episode 20: Brian Bachmann
… back to a new session of Natural Prodcast. I’ve got two things I wanted to tell you about in this introduction. First … systems. But it allows us to assay on a single cell level against cell lines and against primary cells isolated from … –what you need is what JGI is providing, which is a giant warehouse full of microbial sequences. So let’s say …
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