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… Undergraduate Research Experience (CURE) that consists of coordinated hands-on experiments across fungal biology teaching labs. The purpose of the program is to: train students and professors in … genome sequencing of new fungal species.  Students collect fungi, sterilize tissue, isolate genes and more. The …

… and other omics technologies.  The exponential growth of DNA sequencing data, coupled with recent computational … artificial Intelligent/machine learning approaches in data analysis and interpretation is creating new opportunities … the Kyrpides group focuses on Microbiome Data Science and analysis of Big Data. The Research Team   …

… research is focused on the discovery and characterization of novel bacterial, archaeal and eukaryotic microbes and … to identify new divergent lineages and expand the Tree of Life. We then investigate the coding potential to find … Exploring the fascinating world of giant viruses, which challenge our understanding of viral …

… and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … bacteria, because it is so easy to sequence their genomes comparatively to especially plants. So yeah, so from there, … would have really done a somewhat exhaustive chemical analysis of a bacterium that they’re interested in, usually …

… focuses on using cutting-edge sequencing, annotation and analysis techniques to explore the vast and diverse world of microbes. Studying bacteria and archaea, including those … associated with microeukaryotes, enhances our understanding of terrestrial biogeochemical cycling and inter-organismal …

… uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work … drive innovations that could advance our understanding of Earth’s ecosystems. … tools and visualization resources that support user analysis of biogeochemically-relevant pathways, enabling …

… The JGI’s Metabolomics Program works to uncover the roles of small molecules in biological systems, linking them with genomic data to enhance our understanding of genome science, organisms, and ecosystems at the … Integrating genomics with metabolomics fuels the discovery  of novel metabolites, genes, and proteins. It also enables …

… for researchers to request the capabilities and expertise of multiple DOE National User Facilities in one research … accepted proposals, sequencing, synthesis, metabolomics and analysis will be provided for free to the PI by the … provides customized analysis, the JGI also participates in publication of results. …

… for researchers to request the capabilities and expertise of both the Joint Genome Institute and the Molecular Foundry … accepted proposals, sequencing, synthesis, metabolomics and analysis will be provided for free to the PI by the … provides customized analysis, the JGI also participates in publication of results. Go here for additionial information, …

… Mass spectrometry based metabolomics Below is a table of standard product offerings, including a description of … cycle times from sample receipt to completion of standard analysis.  Raw data is provided for all sequencing products … submit raw sequence data to  SRA at NCBI once the standard analysis is complete. Raw metabolomics data is submitted to …

… DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … Usually, in a lot of cases, we still have to go through publications to get proteins, and their functions, and all … take to improve on the data side of things and sequencing analysis side of things to really start to be able to …