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DNA Synthesis Program
… The JGI’s DNA Synthesis Program supports a wide range of projects, from … been a pioneering effort in functional genomics since 2012, with a focus on addressing critical energy and environmental … program enables the design and synthesis of complex genetic pathways and biosystems. It The program fosters …
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Partnerships: Adopt-A-Genome
… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s unpublished microbial genomes, with the expectation that faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … A primary purpose of this project is to bring educators from …
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Biodesign
…   The Joint Genome Institute's Biodesign Platform capabilities support researchers exploring how to … pathways, and whole chromosomes for bioenergy, nutrient cycling and bioproduct applications.  The team has three … develops data science tools for workflow management and novel automations for DNA design, assembly and analysis …
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Natural Prodcast Episode 23: Aaron Puri
… DAN: Hey, everybody. Welcome back for another episode of … I really do want you all to hear this great conversation with Aaron Puri. He is an Assistant Professor from the … to identify what’s being made. In some cases it might be novel, in some cases it might be– might be a known structure …
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Natural Prodcast Episode 10: A Primer on Genome Mining
… DAN UDWARY: You’re listening to the Department of Energy … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … machine learning really would help distinguish and predict novel gene clusters. DAN UDWARY: Yeah, it certainly could. …
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Examples: Successful LOIs & Submissions
… See below for examples of successful Letters of Intent to our Community Science Program Large-Scale Call, as well as successful submissions to … for User Science calls. These documents have been shared with permission from the PIs who drafted them.  … Linking lignin engineering to drought stress resilience: RNA-seq and metabolomic insights in lignin biosynthetic …
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Natural Prodcast Episode 24: Jackie Winter and SMC
… DAN UDWARY: Hey, everyone! Welcome to the “Self Promotion … seems to be a new structure, and the microorganisms are novel. I mean, we have Streptomyces , but they’re new … And I think a lot of times, too, when we even look at publications, it’s always positive data, right? No one ever …
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JGI-TMF Critical Minerals and Materials Call
… The joint Critical Minerals and Materials call represents a unique … program seeks research proposals that integrate genomics with nanoscale science, accelerating discoveries and … provides customized analysis, the JGI also participates in publication of results. Go here for additionial information, …
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Industry Engagement Program
… As a National User Facility, the JGI serves more than 2,500 … the public sector: academic and government institutions — with capabilities that had remained largely unknown and … among members that catalyze data flows and promote novel data applications. As a large-scale data generator, …
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Single Cell Research Group
… Research in the Woyke laboratory focuses on the utility of single-cell methods to … candidate phyla, major branches in the phylogenetic tree without cultivated representatives. The “Great Plate-Count … Phylogenetic diversity estimates show that the gap between cultivated and uncultivated …
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Environmental Genomics Group
… Research in the Eloe-Fadrosh group focuses on using … thousands of metagenomes for signatures of viruses and novel microbial lineages, and reconstruct metabolic properties encoded within those genomes. Our aim is to more fully capture … Our research focuses on the assembly of metagenomic sequence data …
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Metabolomics
…   Metabolomics strengthens -omics technologies at the JGI by … play in diverse biological systems, sheds light on nutrient cycling, and leads to the discovery of new molecules and … mass spectrometry (LC-MS) based methods in combination with advanced computational analysis.   Overview of …
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