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… analysis and interpretation is creating new opportunities for breakthrough discoveries and catalyzing a major … A global metagenomic map of urban microbiomes and antimicrobial resistance. Cell . 184(13):3376-3393 Almeida A, et … Science 344(6186):909-13 … Research Efforts … Selected Publications … For further details, please reach out to the …

… to decode the genomes of microbes in their natural environments. This work encompasses bacteria, archaea, and … genetic elements. Beyond exploring and characterizing microbial diversity, work in the Metagenome Program uses … diversity and metabolic potential, with implications for energy production, environmental sustainability, and …

… to completion of standard analysis.  Raw data is provided for all sequencing products below. In addition, JGI will … features in spectra. 167/214 Metagenome Metatranscriptome Environmental transcript sequence Assembly, annotation ( … physical separation of a biologically relevant unit from a microbial community, such as a microcolony, microbial …

The Facilities Integrating Collaborations for User Science (FICUS) call represents a unique … provides customized analysis, the JGI also participates in publication of results. … Proposals for the annual FICUS … for Structural Molecular Biology . … Accessing NEON’s Environmental Sample Archives, Applying JGI and EMSL Omics …

… and evolutionary parameters driving virus:host dynamics in environmental microbial communities. This involves both … overview and major challenges of host prediction methods for uncultivated phages.  Current Opinion in Virology .  49 … abundant ocean viruses.  Nature . 537:689-93. … Selected Publications … For further information contact the Group …

… and scientists of secondary metabolism. Welcome back for our second season of Natural Prodcast. This first … Genome Institute is under the DOE’s mission of energy and environment. And so we know that lots of different types of … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, …

… experimental characterization methods, in addition to bioinformatics tools to elucidate phage function in this … ATAC-seq, and spatial transcriptomics to profile the plant/environmental interface. We are using these methods to … of plant/environmental responses … Selected Publications … Research Team Alumni … For further details, …

I wanted to tell you about in this introduction. First and foremost, our interview this week is with Professor Brian … let’s see what caves have to offer because they’re unique environments. These are structures that are millions of … of thought with that. So some people are interested in cave microbial– people are interested in the more extreme …

Mexico, and an incredibly bright guy who’s been thinking for a long time about the evolution and natural products … they don’t tend to be exposed to many dramatic changes, environmentally speaking. It’s hard to imagine that there … of natural product biosynthesis in bacteria ” The ActDES publication came out after we talked. It looks like a great …

… … DAN UDWARY: Hey, everyone. I’ve got a great episode for you here today. We got the opportunity to talk to one of … create a program that involves researching the local marine environment. I went out and picked up marine plants, I … powerful people. These were people that really controlled microbial drug discovery. And a guy like me, with no …

Every approved proposal starts with a User Agreement — before any work can begin, including the submission of samples for sequencing, or … rights in technical data, project reporting to the DOE, and publication requirements. An official with authority is …

… metabolites all refer to the chemicals that make species unique and different from one another. They are incredibly important to medicine, the environment, and human health. As the JGI acts on its goals in — and builds out its capabilities for — secondary metabolism research, “Natural Prodcast” …