Search

… collaborative user projects, the JGI’s Plant Program delves into the natural world’s potential to address global … to current problems facing humanity. A major focus are biofuel feedstock species and plant-microbe interactions, … resilience. The program’s discoveries support a plant based bioeconomy where plants are a major source of chemical …

… DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … you see that research or those results heading? Toward an application, toward just better understanding fungal …

… Biology is currently experiencing a revolution brought on by rapid developments in … and other omics technologies.  The exponential growth of DNA sequencing data, coupled with recent computational … advances in management, processing and visualization of “big data,” and artificial Intelligent/machine learning …

… are complex organisms that harbor a fantastic diversity of cell types and associated organisms, including fungal and bacterial symbionts, detrimental … including single-cell and spatial transcriptomics barcode-based genetics (RB-TnSeq), and computational genomics to …

… (Trillions) Operating Hours Goal  Actual Total*   Actual % of Goal   Goal (hours)**   Actual Total   Actual % Goal   FY … PacBio sequencing platforms. **Operating Hours target is based on 98% of the total available hours.   FY 2025 DOE … = 91 days; Actual Operation = 24 days due to significant sequencer downtime related to the shelter-in-place. ††† …

… a DNA synthesis production group and a synthetic biology applications group. The DNA synthesis and assembly group: … as user facility that aims to provide access to state-of-the-art DNA synthesis and assembly technologies to the … We focus our efforts on integrating database mining and sequence design with scaling the production of large, …

… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … technology, but interesting biology and a potential application of translation in medicine. So it’s a really … develop enabling technologies. ie how to translate the ATGC sequence into discrete small molecules. So, Dan, I’m very …

… Below is a brief description of the process needed to prepare and ship samples for sequencing by the JGI.  Additionally it includes instructions on accessing sample-level reports and … sample QC requirements and protocols Obtaining DNA and RNA of suitable quantity and quality has been the rate-limiting …

… The JGI’s Metabolomics Program works to uncover the roles of small molecules in biological systems, linking them with genomic data to … exploration of energy and nutrient exchange, as well as microbial and plant responses to environmental changes. With … Program is focused on understanding the critical roles of metabolites in living systems, particularly as they …

… DAN UDWARY: Hey everyone and welcome back to a new session of Natural Prodcast. I’ve got two things I wanted to tell … And at the time, it was really exciting when people would sequence [DNA]. The genome was– well, that hadn’t really … them. And I would say that if you looked at the grant applications for the last 40 years for studying biosynthetic …

… DAN: Hey, everybody. Welcome back for another episode of Natural Prodcast. Right now I’m working on this the … of their synthases so that we can start to use the DNA sequence to predict or just understand better the language … scale a little bit for the project. DAN: Do you see broader applications for understanding these systems? AARON PURI: …

… for researchers to request the capabilities and expertise of multiple DOE National User Facilities in one research proposal.  Successful applications will focus on high-risk/high-payoff proposals … provides customized analysis, the JGI also participates in publication of results. …