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… to unlock their potential for bioenergy, environmental sustainability, and bioproducts. By sequencing and analyzing the … that enable fungi and algae to play a vital role in carbon cycling, biodegradation and biogeochemistry. This … Program aims to streamline genome analysis workflows for microbial eukaryotes, build fungal and algal pangenomes, and …

The Facilities Integrating Collaborations for User Science (FICUS) call … provides customized analysis, the JGI also participates in publication of results. … Proposals for the annual FICUS … available at JGI and EMSL such as DNA-SIP, Protein SIP, Flux Balance analysis with metabolites, Isotope Ratio Mass …

… critical ecosystem functions and affect global nutrient cycling, however they do so under strong constraints exerted by … parameters driving virus:host dynamics in environmental microbial communities. This involves both experimental and … abundant ocean viruses.  Nature . 537:689-93. … Selected Publications … For further information contact the Group …

Research in the Eloe-Fadrosh group focuses on using genome-resolved … of metagenomes for signatures of viruses and novel microbial lineages, and reconstruct metabolic properties … Microbiology , 15032. 10.1038/nmicrobiol.2015.32 … Selected Publications … For further details, please reach out to the …

UDWARY: It’s been a while, but Natural Prodcast is back again for another round of episodes. If you stick around for … and work within the DOE emission space of bioenergy, carbon cycling, biogeochemistry, bioproducts. So we cannot … do the bioinformatics and to synthesize these results into publication? So there’s this really important because we …

See below for examples of successful Letters of Intent to our Community Science Program Large-Scale Call, as … genetic microdiversity or core metabolic flexibility? … Microbial contributions to soil carbon storage during simulated range shifts of plant-fungal …

The JGI has diverse capabilities in: DNA and RNA sequencing, Sample … physical separation of a biologically relevant unit from a microbial community, such as a microcolony, microbial …

Program works to uncover the roles of small molecules in biological systems, linking them with genomic data to … also enables exploration of energy and nutrient exchange, as well as microbial and plant responses to environmental changes. With …

DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … oxidative conversions and do some really complicated carbon skeleton rearrangements, chemistry that we probably …

Research in the Woyke laboratory focuses on the utility of … in 1985, which highlights our skewed understanding of microbial metabolism towards a minority of cultivated … … Research Interests … Former Lab Members … Selected Publications … For further details, please reach out to the …

… it wouldn’t exist without cyanobacteria; they began oxygenating Earth over two billion years ago. A team of researchers … Park to study how cyanobacteria are living, communally, in microbial mats. Along the way, they’ve encountered surprises, adopted …

… a team has comprehensively described host-virus dynamics in a microbial mat. The Science In microbial mats, … microbial metabolism affects the biogeochemical cycling of carbon, nitrogen, and other elements, better understanding … mats helps constrain models that estimate biogeochemical fluxes. Summary Previous work on microbial mats had …