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Sequencing Submission Requirements for DNA Synthesis
… files. ApE is an open source desktop application written by M. Wayne Davis or commercial options include SnapGene . …
Learn more
JGI-TMF Critical Minerals and Materials Call
… of critical minerals and materials. For accepted proposals, sequencing, synthesis, metabolomics and analysis will be provided for free to the PI by the Department of Energy’s funding of the JGI. There is … provides customized analysis, the JGI also participates in publication of results. Go here for additionial information, …
Learn more
Natural Prodcast Episode 10: A Primer on Genome Mining
… the time. DAN UDWARY: All right. So I thought we’d kick things off this time around, talking about a subject that’s … can just mediate so many kinds of interactions. And by understanding them, we can promote the health and … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, …
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FICUS
… beyond what each of these facilities could generate by itself.   Accepted projects must address or be otherwise … to DOE mission is appropriate. For accepted proposals, sequencing, synthesis, metabolomics and analysis will be … provides customized analysis, the JGI also participates in publication of results. …
Learn more
FICUS Overview
… A Letter of Intent is required. For accepted proposals, sequencing, synthesis, metabolomics and analysis will be provided for free to the PI by the Department of Energy’s funding of the JGI. There is … provides customized analysis, the JGI also participates in publication of results. …
Learn more
FICUS-NERSC/KBASE
… next review cycle. All proposals undergo technical review by JGI staff as well as staff at the other participating … review, proposals are evaluated and placed in rank order by the reviewers. The ranked proposal list, along with a … more customized analysis, the JGI also participates in publication of results. …
Learn more
Biodesign
… convert sequence into functional assessments. This is done by synthesizing genes, pathways, and whole chromosomes for … to validate hypotheses generated from mining genomic data by designing and assembling physical DNA constructs that can … length  Pooled libraries such as sgRNA, promoter or MoClo assemblies …
Learn more
Industry Engagement Program
… As a National User Facility, the JGI serves more than 2,500 users that predominately come from the public sector: … that had remained largely unknown and underutilized by industry. When Director Nigel Mouncey joined the JGI in … Industry Partners access to our vast set of resources:  JGI sequencing technologies include scaling technologies and …
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Natural Prodcast Episode 24: Jackie Winter and SMC
… And so I see all the download numbers. And so one of the things I’ve noticed is that whenever it’s me or whenever we’re … And I think a lot of times, too, when we even look at publications, it’s always positive data, right? No one ever … it will be– it could be a viral sequence. It could be a contig. It could be whatever somebody has submitted to us. …
Learn more
Community Science Program
… community at large with access to high-throughput sequencing, synthesis, and metabolomics at the JGI for … based on their DOE relevance.  For accepted proposals, sequencing, synthesis, metabolomics and analysis will be performed by the JGI at no cost to the user. …
Learn more
How to Submit Sequencing Samples
… of the process needed to prepare and ship samples for sequencing by the JGI.  Additionally it includes instructions on … material is one of the greatest predictors of a successful sequencing project. It is imperative that users properly … Weight DNA extraction and quality control (from PacBio) 2) Review guidelines detailing quantity and quality …
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Natural Prodcast Episode 4: Nancy Keller
… has been dominated for … well, as long as I can remember, by bacterial research.  So it was great to hear her passion … of probing fungi for natural products and finding new things. And so, really happy to have you here. And thanks so … and India, very cheap for $100-$200. But you have so many contigs. This is a problem with natural product clusters. …
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