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… discovery at the DOE Office of Science through high performance computing (HPC) and data analysis.  The DOE Systems Biology Knowledgebase ( … … For sequencing projects, once work is under way, raw sequence data is released to NCBI’s Sequence Read Archive on …

… (UEC) represents the JGI user community and is responsible for providing input and advice on JGI policies and practices … Vice-Chair will be elected. The Chair is responsible for preparing the agenda of UEC meetings in coordination with … Advisory Committee. The Vice-Chair is responsible for preparing an annual UEC report. Elections Elections are held …

… can visit the Products & Offerings section of our website for more details, including a downloadable pdf of products … then be used to submit proposals, sample and project metadata, and to access JGI tools and systems. … Go to the “ … I request a culture/slant/DNA of an organism that has been sequenced at the JGI? … How do I check the current status of …

Every approved proposal starts with a User Agreement — before any work can begin, including the submission of samples for sequencing, or the submission of sequencing data for synthesis. This agreement, required by the DOE for …

… welcome, Nadine. ALISON TAKEMURA: What is the big picture for you in your lab? NADINE ZIEMERT: Big picture, I want to … much I actually can learn just by really digging into the data and understanding what’s going on there. And now, … it would work, but we actually found fosmids. And we sequenced the whole fosmid at the time with Sanger …

… inter-organismal interactions. These insights are crucial for addressing key environmental challenges, such as … The program provides high-quality, large-scale genomic data to advance microbial research that drives sustainable … resequencing, RNA sequencing and epigenomics. Expansion of sequence space:  The JGI generates reference genomes from …

… diversity and metabolic potential, with implications for energy production, environmental sustainability, and … Program combines large-scale, time-series metagenomic data with detailed characterization of model systems to … comprising the largest public collection of plasmid sequences identified from genomes, SAGs, MAGs, metagenomes …

The Mycological Curriculum for Education and Discovery  (Myco-Ed) is a Course-Based … train students and professors in laboratory techniques and data analyses compile original data for improving fungal … and distribution of fungal genome datasets. It includes JGI-sequenced and publicly available datasets encompassing a …

The Facilities Integrating Collaborations for User Science (FICUS) call represents a unique opportunity for researchers to request the capabilities and expertise of … across at least two of the facilities, and generate datasets beyond what each of these facilities could generate …

The Joint Genome Institute's DNA Synthesis Platform capabilities support researchers exploring how to convert sequence into functional assessments. This is done by … Synthetic Biology Informatics Group : a team that develops data science tools for workflow management and novel …

The CSP New Investigator Call is for investigators and research initiatives new to the JGI. … FICUS proposal.   Competitive projects will provide pilot data to assess feasibility of a novel approach or form the foundation for a large-scale CSP proposal submission. Sequence requests should not exceed 3 Tb in total. Proposals …

SMC – which is the new Secondary Metabolism Collaboratory data portal I’ve been working on with my colleagues Drew … Doering and Bryce Foster and too many others to name at JGI for the last two years or so. SMC is now released and ready … have an E. coli strain that we’ve been working on that we sequenced the genome. And it has 17 resistant genes on a …