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… profiles from diverse biological and environmental samples using advanced liquid chromatography mass spectrometry … samples, including organisms (e.g. microbes, fungi, plant), media in which they grow, as well as different types … soil, lake).  A wide range of metabolites are identified using LC-MS/MS methods optimized for specific types of …

Fungal Standard Draft Whole genome shotgun sequencing using long-read sequencing. Exact library types and quality … contigs. Assembly, annotation ( IMG ) Depends on project Plant and Algal Standard Draft Whole genome shotgun … these projects. Assembly, annotation for ( Phytozome for plant, Phycocosm for algae) depends on genome Plant and …

… approaches to unravel functional capabilities of plants, microbes and microbial communities, global carbon … LOI is approved. The letter of intent must be submitted using our web-based form . Submitters whose LOIs/proposals … work will NOT be considered under this program. Plant pathogens will only be considered if they are of relevance …

… that is active against Sartoria which is a really big pathogen of wheat in cereal crops in Europe. And the … with a contract manufacturer to actually have them build a plant for production and fermentation and transfer that … organisms, to looking at pathways, and to looking at the interactions of organisms and environments.  DAN: Where do …

… ag[riculture] and I really liked – I became interested in plant disease in part because of what happened in my Peace … So, well, two things. My PhD work was with a fungal pathogen called Cochliobulis heterostrophis . This is a very … the secondary metabolome, of fungi in inter-Kingdom interactions. So fungi, bacteria and their host. And I think …

… called “disease suppression”, where the microbiome of a plant, so the bacteria living on and inside the roots are protecting the plants against pathogens. So usually fungal or oomycete pathogens. In this … that the expression of these gene clusters play in these interactions. But also things like trying to predict at …

Pennacchio PMO Lead, Metabolomics Program Kerrie Barry Plant and Algal Genomics Natasha Brown Supply Chain Manager …

Uncovering associations between plant roots and fungi that can help or harm plant host … . They looked for genes known to be involved in fungal-host interactions and identified 84 gene families that were common in fungi that live within plants (endophytes). These include genes that degrade plant cell …

Genome Portal. You can navigate to the proposal info page using any of the below methods: Search the Genome Portal … Portal . Click "Advanced Search" next to the search bar. Using the "Search Within" dropdown, select "Proposals". Search for your proposal using your proposal's WIP ID (ex. 503582). Click on the …

… a saprophyte, living off decaying organic matter, or as an endophyte, living between a plant’s root cells. The fungus is almost always found among … and annotated for this study. The team found that, unlike pathogenic or mycorrhizal fungi (mutualist symbionts that …

… ecosystems.  By studying microbial communities and their interactions, the Program aims to unlock the fundamental … sequencing of microbial communities to uncover the complex interactions and functions that shape ecosystems. By … understanding of microbial community assembly and microbial interactions, including microbe-microbe and virus-microbe …