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… which includes the Sequencing Technologies team, relies on collaborations with Science Programs and Operations teams to enable the JGI’s focus on expanding molecular … An assay used for profiling transcription factor binding sites across entire genomes. This … high-throughput processing of samples in 96-well plates on automated liquid handler platforms, substantially …

… like, and then you could characterize it. The classical study that demonstrated this is Challis et al, Chemistry and … and archaeal genomes that were created – these are Metagenome Associated Genomes, or MAGs. So these are genomes … disparate environments. There’s some marine. There’s some soil samples. There’s human gut samples. There’s lots and …

… The Micro-Scale Applications group explores the genetic makeup of natural microbial communities using a variety of cutting-edge approaches.  Our … the quality of single-cell genomes and directly link functional information with individual cells. Research Team    …

… what was this bacterium, and why did your group want to study it? Marnix Medema: You mean the PhD project that I … primer episode, we talked about genome mining through some metagenome associated genomes. And yes, antiSMASH is … the action of the microbiome because if you sterilize the soil, the protective effect is gone. You can transplant the …

… Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Hi again, and welcome to Episode 6 of Natural Prodcast. What you’re going to … for antibiotics and the microbes that make them is in the soil. There’s … uh… there’s an issue there though, in that …

… Our research is focused on the discovery and characterization of novel bacterial, archaeal and eukaryotic microbes and viruses in environmental sequence data. We use multi-omics (metagenomics, … challenge our understanding of viral complexity and evolution Our research focuses on discovering and characterizing …

… and algae to unlock their potential for bioenergy, environmental sustainability, and bioproducts. By sequencing and … that enable fungi and algae to play a vital role in carbon cycling, biodegradation and biogeochemistry. This research helps translate their … play a critical role in ecological processes such as carbon cycling, biodegradation and biogeochemistry. The …

… in Florida to discuss a JGI pilot project involving soil sampling in the Florida Everglades to help train the … Jonathan’s email request reached  Emiley Eloe-Fadrosh , the Metagenome Program Head at the  U.S. Department of Energy … do an environmental microbial community (metagenomic) soil study in an untouched region of the Everglades, the …

… JGI Mission As a U.S. Department of Energy Office of Science user … genomic capabilities, large-scale AI-ready data and professional expertise to support the global research community in studies of complex biological and environmental … and nutrient cycling to enhance crop resilience, improve soil health, and make more efficient use of marginal lands …

… Trubl, a virologist and postdoc at Lawrence Livermore National Laboratory, is using bioinformatics and isotopes to track how viruses influence the flow of carbon in permafrost.  …

… A metagenomic look at the soil microbes present a year after a wildfire. The Science … a microbiome of bacteria, viruses and fungi process carbon and nitrogen, paving the way for future plants and trees … genes with functions useful for forest recovery, this study sheds light on how microbes contribute as a forest …

… DAN: Hey Marcy!  ALISON: Hey Marcy?  MARCY: Hello. How’s it going?  DAN: Good. … now?  MARCY: Sure. So my lab has really converged on the study of host-microbe chemistry. And the interactions– As … is “knowledge”. So it’s knowledge of where medicines come from, essentially. So yeah.  MARCY: Yeah. And so that …