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… Below is a brief description of the process needed to prepare and ship samples for sequencing by the JGI.  Additionally it includes instructions on accessing … Click the drop-downs to learn more about each step in the process. If you have any questions, please contact your …

… The JGI is leveraging its current partnerships to offer new capabilities and resources to users through a BER data … advancements enabled by artificial intelligence and other tools. By bringing users together through our systems, we build far-reaching communities of researchers to bring down …

… if we’re finding an audience outside of just us. If you’re new to natural products science, please let me know! I’m … we’re now very much – we’re interested in how we can build tools which will let us see the whole landscape of natural … and new developments in mass spectrometry hardware, software, new developments in NMR methods, ultra fast …

…   The JGI’s Secondary Metabolites Program focuses on the … and their roles in the environment, can unlock new avenues for bio-based products and bioenergy crop … the program strives to facilitate the discovery of new bio-based molecules that can drive innovations in …

… analogy to the California gold rush. And we’ll talk about a new JGI paper that’s just come out where I got the chance to … little vague to me. What do you mean by putting a bunch of tools in one package? DAN UDWARY: Oh, sure. So if I wanted … you see sometimes. So pretty recently, Merck put out some software called DeepBGC , which is a machine learning tool …

… The JGI has diverse capabilities in: DNA and RNA sequencing, Sample and library preparation, Biodesign and pathway engineering Mass spectrometry based … sequencing products below. In addition, JGI will submit raw sequence data to  SRA at NCBI once the standard analysis is …

…   The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a national user facility located at Lawrence … researchers and support staff in the Integrative Genomics Building in Berkeley, California.  Our location at the IGB … We provide access to large-scale datasets and analysis tools for genomes, metagenomes, and metabolomics through its …

… Europe. So if there are any kind of dated references to the news, that’s why. But it was a really fun conversation. And … more into the meta genome mining. We started to build the tools for natural product researchers that easily can … to– DAN UDWARY: Yeah, that’s always a problem in academic software development. NADINE ZIEMERT: Yeah. And I think, …

… in the analysis and publication of the claimed genome sequences. This opportunity, provided by the Joint Genome Institute, builds upon thousands of microbial genomes that have been … Reach the next generation of genome scientists and recruit new talent for biosciences.  Adopt-a-Genome has: ~20 faculty …

… last decade or so. He’s involved with a lot of the common tools that genome miners use, including antiSMASH, MIBiG, and newer efforts, like BiG-scape and BiG-SLiCE, and now the … of biosynthetic gene clusters. So it’s actually a software tool and it takes as input – it takes genome …

… The program’s fungal genomics research explores new metabolic processes and enzymes that can be applied in … the PhycoCosm portal. The Fungal & Algal Program aims to streamline genome analysis workflows for microbial … fungal and algal pangenomes, and integrate multi-omics tools to enhance functional studies. These efforts seek to …

… niche in chemical enzymology. So, we talked about her JGI DNA synthesis project to explore the chemical capabilities … that might help? Like, if you have an unknown sequence or new flavin monooxygenases, you could say, oh Alison … with. DAN UDWARY: Yeah. ALISON NARAYAN: And there are other tools that I think are really useful, that again are set up …