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Natural Prodcast Episode 11: Marnix Medema
… … Dan Udwary: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about … we, for example, are really interested in metagenomes and microbiomes and figuring out which gene clusters are … of Science user facility located at Lawrence Berkeley National Lab. You can find links to transcripts, more …
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Simon Roux Named 2025 ASM Microbiome Data Prize Awardee
Congratulations to US Department of Energy (DOE) Joint Genome Institute (JGI) staff scientist Simon Roux , who was recently selected as the 2025 recipient of the Microbiome Data Prize by the American Society for … the development of the virus and plasmid workflows for the National Microbiome Data Collaborative.  This award …
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Natural Prodcast Episode 10: A Primer on Genome Mining
DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about … And then coming up after that, we’ll have a lineup of international scientists who also do genome mining. We’ve got a … Nature Biotechnology, titled ‘A genomic catalog of Earth’s microbiomes’ . (Citation: Nayfach S et al. A Genomic Catalog …
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FICUS Overview
… of multiple Department of Energy Office of Science National User Facilities into their research. In recognition of the increasingly collaborative and multidisciplinary nature of DOE mission … There is no cost to the user and no granting of funds. All data is made publicly available in accordance with  JGI’s …
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Natural Prodcast Episode 18: A CSP Primer
… way to the end, then you’ve probably heard me say that the Joint Genome Institute is a “Department of Energy user … production, and scientific research, especially at US National Labs, like Lawrence Berkeley Lab (that’s LBL), the … related to human health or creating vaccines, human gut microbiomes. We don’t do things related to human health. In …
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IMG Group
… (meta)genomic, (meta)transcriptomic, and functional genomic data and serving them to users via the Integrated Microbial Genomes & Microbiomes (IMG/M) system. Research Team    … The … processing and analysis pipelines for the interpretation of microbiome omics data Developing forward-looking strategies …
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Natural Prodcast Episode 17: Cassandra Quave
… is Professor Cassandra Quave from Emory University, with joint appointments in the School of Medicine and College of … early stage drug discovery in general, and a possible data-driven future for plant natural products. Happy … drug from the microbes in that soil, there are now international regulations that provide a structure for ensuring …
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Natural Prodcast Episode 9: Roger Linington
… from the ICBG training program, which stands for International Cooperative Biodiversity Groups, and it’s this … or NPAtlas, a freely accessible natural products structure database, which is going to be just invaluable to the … Prodcast, a podcast produced by the US Department of Energy Joint Genome Institute, a DOE Office of Science User …
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Natural Prodcast Episode 12: Nadine Ziemert
… … DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about … in collaboration with other people, lake sediments. We have microbiomes from different organisms, including the human … of Science user facility, located at Lawrence Berkeley National Lab. You can find links to transcripts, more …
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Natural Prodcast Episode 14: Nigel Mouncey
… things off today with my interview with the Director of the Joint Genome Institute and head of the Secondary Metabolites … an opportunity really to learn about JGI, learn about the national lab system, doing some research then. Of course, I … heard me speak recently have heard me talk about the new data portal that we’re building. And I’ve been eager to …
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Metabolomics Program
… molecules in biological systems, linking them with genomic data to enhance our understanding of genome science, … of high performance plants and microbes, and understanding microbiome interactions. The  insights derived are crucial … … EcoFABs:  For studying microbe-host (or plant-microbiome) interactions under controlled conditions, …
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CSP Large Scale Call
… for scientific merit, DOE mission relevance, proposed data usage by the applicant/community, and track record of … for scientific merit, DOE mission relevance , proposed data usage by the applicant/community, and track record of …
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