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Publication Policy
… research project are appropriately recognized and credited for their work, while also adhering to the authorship … and collaborators have the right to produce manuscripts for publication and the responsibility for leading the efforts to do so, and JGI expects acknowledgment (see Auspice Statement below) for the generation …
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CSP New Investigator Call
… The CSP New Investigator Call is for investigators and research initiatives new to the JGI. … pilot data to assess feasibility of a novel approach or form the foundation for a large-scale CSP proposal submission. Sequence requests … All proposals will be externally peer-reviewed for scientific merit, DOE mission relevance , proposed data …
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JGI-TMF Critical Minerals and Materials Call
… Minerals and Materials call represents a unique opportunity for researchers to request the capabilities and expertise of … science, accelerating discoveries and developing transformative bio-based technologies that address challenges in … and no granting of funds. All JGI data is made publicly available in accordance with the JGI’s Data Policy . In …
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Institutional User Agreements
… Every approved proposal starts with a User Agreement — before any work can begin, including the submission of samples for sequencing, or the submission of sequencing data for synthesis. This agreement, required by the DOE for all … , DNA Synthesis Appendix  and DNA Sequencing Appendix are available for download.)  After your home institution has …
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Data Policy
… Data Policy. It is our mission to support open data and information sharing. We also recognize the need to have a … research data and analysis products (referred to as “data” for the remainder of this policy) produced through all user … Program (CSP), Facilities Integrating Collaborations for User Science (FICUS) initiative, Director’s Science …
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How to Submit Sequencing Samples
… of the process needed to prepare and ship samples for sequencing by the JGI.  Additionally it includes … quantity and quality has been the rate-limiting step for many projects at the JGI. The quality of the starting … sequencing workflows and provide guidance as to how to perform sample QC prior to shipment: Importance of Sample QC …
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JGI Portals
… discoverability and accessibility are critical requirements for amplifying the JGI’s impact. Data generated from a single investment will be reused for further science.  Notices Data Portal files will be inaccessible July 22–July 24 for computing upgrades . We regret any inconvenience. …
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Who We Are
… staff in the Integrative Genomics Building in Berkeley, California.  Our location at the IGB fosters team science and … with partner organizations such as the DOE Systems Biology Knowledgebase and the National Microbiome Data Collective.    … biotechnology through analyzing and harnessing genomic information from plants, fungi, algae, non-medical microbes, …
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Natural Prodcast Episode 17: Cassandra Quave
… Dan Udwary: Hey everybody! Welcome back for Natural Prodcast episode 17. The guest we have this week … plants for drug discovery in antibiotics, anticancer, and now COVID. We also wanted to talk to her because she’s … read by Cassandra, and the paperback version will be available in June. You can get more info on all of this at …
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CSP Large Scale Call
… genomic science projects that address biological functions for biomanufacturing, critical minerals and materials, … All proposals will be externally peer-reviewed for scientific merit, DOE mission relevance, proposed data … the applicant/community, and track record of the applicant. For accepted proposals, sequencing, synthesis, metabolomics …
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Products
… to completion of standard analysis.  Raw data is provided for all sequencing products below. In addition, JGI will … submitted to the  MassIVE repository . Not all products are available for all proposal calls.   Please review the call … contact the relevant JGI  Science Program leads to discuss available options. Note: In 2021, we conducted an extensive …
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Natural Prodcast Episode 4: Nancy Keller
… from the University of Wisconsin. Like we discussed in the primer podcasts ( part 1 here , part 2 here , and part 3 … I’m releasing along with this one, at the same time.   But now, here’s the conversation with one of my heroes, Dr. … genes, and their proteins, and since this one happens to fall in my area of expertise, it seemed like a good one to …
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