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… “Natural Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Hey there, and … for the US Department of Energy Joint Genome Institute, or JGI. JGI is a DOE Office of Science User Facility located at … all over the place. So that smell of rain is just these terpene molecules that these bacteria produce and secrete out …

… free to the PI by the Department of Energy’s funding of the JGI. There is no cost to the user and no granting of funds. … All data is made publicly available in accordance with  JGI’s Data Policy . In cases where the JGI provides customized analysis, the JGI also participates …

… The JGI’s DNA Synthesis Program supports a wide range of … program fosters collaboration with U.S. and international scientists to drive innovations that align with DOE's … Genome to Enzymes and Pathways focuses on discovering and … vital to DOE missions. Using bioinformatics tools and genome portals, we study lignocellulose decomposition, CO2 …

… Overview The JGI provides sequencing, synthesis, and targeted … proposals are NOT eligible for BERSS support through the JGI (with the exceptions of DE-FOA-0003453 and … previously negotiated with the JGI will only be accepted pending available capacity, technical review and scope …

… Research in the Eloe-Fadrosh group focuses on using genome-resolved metagenomic approaches to identify and … computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial … and reconstruct metabolic properties encoded within those genomes. Our aim is to more fully capture microbial and …

… in the early 2000s called Ecopia, which was a very early genome mining company, back when DNA sequencing of natural product pathways was hard and expensive to do. As I said, Brian is now at Vanderbilt, and … you can always find at naturalprodcast.com or through the JGI website at jgi.doe.gov . There’s a lot more to talk …

… and head of the Secondary Metabolites Science Program at JGI, and also my boss, Nigel Mouncey. I got him on to talk … the work that we were doing. And then to really see what happens when you scale strains and you scale process … deeper relationships between industry and the academic scientists in industrial microbiology. How we could think …

… The Joint Genome Institute and the Molecular Foundry have launched a … Access to the Molecular Foundry and use of JGI capabilities is free. The JGI supports remote users. … users of the Molecular Foundry work side-by-side with our scientists at Berkeley Lab. Access to the Molecular Foundry …

… As a National User Facility, the JGI serves more than 2,500 users that predominately come … by industry. When Director Nigel Mouncey joined the JGI in 2017, he brought with him 20 years of industry … accessible, AI-ready large-scale data repositories for genome information with analysis tools for mining and …

… The JGI’s Metabolomics Program works to uncover the roles of … them with genomic data to enhance our understanding of genome science, organisms, and ecosystems at the molecular … of experimental workflows and computational analysis, JGI scientists are able to link metabolic activity with gene …

… Data Management at the JGI … JGI Scientist Code of Conduct …

… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s unpublished microbial genomes, with the expectation … a fresh cohort of users Reach the next generation of genome scientists and recruit new talent for biosciences.  … microbial genome and microbiome datasets. It includes JGI-sequenced and publicly available datasets encompassing …