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… to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural products and the … to the California gold rush. And we’ll talk about a new JGI paper that’s just come out where I got the chance to do … in Yu et al, APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2004, 1253–1262, 70:3 ALISON TAKEMURA: And so did you succeed in …

… approaches to identify and characterize genomic information from uncultivated microbes and viruses. We develop computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial … research focuses on the assembly of metagenomic sequence data into microbial genomes, which is of fundamental value to …

… of samples for sequencing, or the submission of sequencing data for synthesis. This agreement, required by the DOE for … must have their home/employing institution sign a JGI Non-Proprietary User Agreement and Appendix. An Appendix … new signed paperwork, and getting new documents in place early will prevent disruption and delays on the work. The …

… Below is a brief description of the process needed to prepare and ship samples for sequencing by the JGI.  Additionally it includes instructions on accessing sample-level reports and tracking statuses.  Please follow the steps outlined below. Click the … 1) Review JGI sample QC requirements and protocols Obtaining DNA and …

… DAN UDWARY: Hey, everyone. I’ve got a great episode for you here today. We got the opportunity to … things I want to make sure that we talk about. You have a JGI project going with us that we want to talk a little bit … chemistry. And I’ve studied microbiology for about 25, 30 years. And I can actually go give a talk at ASM [The …

… DOE Metrics Sequencing Quarter Total Bases (Trillions) Operating Hours Goal  Actual Total*   Actual % of Goal   Goal … target is based on 98% of the total available hours.   FY 2025 DOE Metrics There were 2,627 unique* JGI users in FY2025 , which includes Principal Investigators …

… in firmly in the chemistry bucket. [LAUGHS] I don’t know that that’s ever necessarily like a good description of anyone … say a clutch is probably the size of a golf ball and has 25 to 50 eggs. I’m guessing here.  DAN: Sure, sure.  MARCY: … do when you’re exploring your systems. Because I think the JGI has a little bit of a different approach. We don’t …

… Hey, everyone! Welcome to the “Self Promotion Episode” of Natural Prodcast. A little bit of a bonus episode, since I’m … Doering and Bryce Foster and too many others to name at JGI for the last two years or so. SMC is now released and … part of the first one that you were on. But that’s not nearly enough. And so I thought it would be good to spend …

… to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural products and the … We had Brad on and he kind of waxed poetic about the early parts of the project. How did that postdoc where– I … was fascinating, I think. DAN UDWARY: Yeah, and that was a JGI Community Sequencing Project. You’re right, yeah. NADINE …

… to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the science and scientists … because I was always swimming or surfing. And you know, 25 hours a day we’re at the beach practically. It was just – … first genome sequence with you. Brad: That’s right,  Dan: JGI did it in fact. Brad: That was a magical project I …

… to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural products and the … that you do, then it’s very easy to think that, OK, I find 25 gene clusters, there must be 25 new compounds. Or … of question have you applied them? Dan Udwary: Well, at JGI we have the Atlas of Biosynthetic Clusters . And this is …

… to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the science and scientists … have that goal. That’s not as much our goal here at the JGI – we are not a medicinally focused organization. And so, … them as very small fungi. And this came from a growth on a cow’s cheek. Historically, before antibiotics were common, …