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Metagenome Program
The Metagenome Program uses advanced sequencing technologies to decode the genomes of microbes in their natural … the Metagenome Program uses several experimental approaches to assess microbial activity across ecosystems.  By studying … communities and their interactions, the Program aims to unlock the fundamental principles that govern ecosystem …
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Project Management Office
Management Office carries out a number of activities to facilitate world-class science. PMO works with users, JGI scientists and technical staff to onboard users and guide them through the process of … DNA Synthesis and Single-Cell Genomics Vivian Ng Fungal Genomics …
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Natural Prodcast Episode 18: A CSP Primer
If you stick around for the next few months, you’re going to hear my last interview with my co-host Alison Takemura, … And I think also the quality that we provide. So for fungal and for a lot of our eukaryotic genomes, all our … after the initiation call. But throughout the whole lifecycle of the proposal, it’s a very collaborative process …
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Computationally Classifying Fungal Lifestyles
Machine learning methods were applied on sequenced fungal genomes to classify gene families. The Science As a proof of … to identify data generated in part through the 1000 Fungal Genomes Project, including 55 newly-sequenced …
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Frequently Asked Questions: Project Management
… https://signon.jgi.doe.gov . This account can then be used to submit proposals, sample and project metadata, and to access JGI tools and systems. … Go to the “ edit contacts … Microbial (IMG–ER) Metagenome and Single Cell (IMG/ M-ER) Fungal (Mycocosm) Algal (Phycocosm) … In general, data …
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Natural Prodcast Episode 13: Francisco Barona Goméz
… … DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural … Yeah, so any metabolite, produced by bacterial or fungal metabolism by microbes, will have a functional role. … at, we will always find a new way on how to do the Krebs cycle. There are microbes that will actually redefine that. …
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Fungal Friends or Foes in Plant Roots
… other plant-associated fungi. Their analysis identified fungal gene families that help determine if these fungi act … boost yields for both food and for candidate bioenergy feedstock crops. Summary A plant is like an office building, its … partnerships. To learn more about these other plant-fungal relationships, an international team led by graduate …
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Programs & Platform Leads
… role in enabling the frontiers of research related to DOE’s missions in bioenergy, carbon cycling and biogeochemistry. In complement to the Community Science Program, JGI researchers drive innovations that cross the boundaries of the Plant, Fungal, Algal, Microbial, Metagenome, Metabolomics, …
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Fungal diversity notes 253–366: taxonomic and phylogenetic contributions to fungal taxa
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Effects of Polar Light Cycle on Microbial Food Web
… with the seasons. The Science Light-harvesting bacteria (phototrophs) in Antarctica’s Ace Lake defy the norm when it … Ace Lake’s bacteria instead go through a boom and bust cycle aligned with light availability. A long-running … by the late spring. Preliminary observations regarding the contributions of algae and viruses to the ecosystem were …
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Natural Prodcast Episode 7: Ben Shen
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … natural products of microbial origin is around 30,000 from fungal, and a 40,000 from bacteria. Okay? And among the … 100,000 bacterial strains, and a hundred thousand fungal strains. And if you believe the prediction that each …
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JGI Advisory Committees Code of Conduct
… of Energy (DOE) Joint Genome Institute (JGI) commit to Lawrence Berkeley National Lab’s (Berkeley Lab’s) core … the relationships we nurture in our workplace and seek to establish with our stakeholders. In working toward a … of the public whose tax dollars support our continuing contributions to advancing the research ecosystem. Their …
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