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Metagenome Program
… uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work … production, environmental sustainability, and many other applications. By understanding how microbes contribute to … Earth’s ecosystems. … The Metagenome Program focuses on the high-throughput sequencing of microbial communities to …
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Partnerships: Myco-Ed
Undergraduate Research Experience (CURE) that consists of coordinated hands-on experiments across fungal biology … … Beyond providing a scalable solution for production of high-quality fungal reference genomes, this program is an … understanding of fungal diversity, ecology, and potential applications. … The Department of Energy Systems Biology …
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Data Policy & Support
… … Read more about our data management practices and the resources we provide. … Read our research integrity and data code of conduct. … Data Management at the JGI … JGI Scientist Code of Conduct … Additional Resources  …
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Natural Prodcast Episode 10: A Primer on Genome Mining
DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … you see that research or those results heading? Toward an application, toward just better understanding fungal … but in subtle ways that affect fitness. And so, doing a high level kind of analysis, you just might not be able to …
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Natural Prodcast Episode 1: The Primer, Part 1
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … products that would cause some, you know, major historical events and craziness in human history.  ALISON: Yeah, that …
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Partnerships: Adopt-A-Genome
… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s unpublished microbial genomes, with the … work with undergraduates in the analysis and publication of the claimed genome sequences. This opportunity, provided by the Department of Energy Joint Genome Institute, builds upon thousands of microbial …
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IMG Group
The IMG group owns and maintains integral components of JGI’s production workflow, and is responsible for the … cliques, it has also become possible to identify speciation events within existing species. Within the JGI’s production … the JGI and the Computational Biosciences Group at the Computing Sciences Research Division of LBNL. … Focus Areas …
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Analyze Data
Chief Informatics Officer …
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Natural Prodcast Episode 11: Marnix Medema
… … Dan Udwary: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … been dead center and a lot of the really important recent events in data analysis and secondary metabolism over the … least a certain level of similarity. So if similarity was higher than a certain kind of volume. And if you do that, …
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Natural Prodcast Episode 12: Nadine Ziemert
… … DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural … mining and the directions it might take in the future. I highly recommend it. I’ll link to it in the show notes. …
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Special Initiatives & Programs
… ,  Science Focus Areas  (SFA) opportunities, and the  Office of Science Early Career Research Program .   If … submit proposals here . Investigators preparing grant applications to DOE-BER and requesting an optional letter of … will develop fuels and products by integrating three highly interconnected DOE priority areas of Feedstock …
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Plant Program
… to current problems facing humanity. A major focus are biofuel feedstock species and plant-microbe interactions, … by environmental change, focusing on plant resilience — highlighting the vulnerabilities of monocultures and the … of natural compounds that support disease resistance, with applications in sustainable agriculture, including the …
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