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JGI Snapshot
Learn more
JGI Advisory Committee
… The JGI Advisory Committee (JAC) is convened by the JGI Director to provide guidance on the Institute’s … management, and operational objectives. Serving as JGI’s principal external advisory body, the JAC includes …
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The JGI Leadership Team
… the direction of programs and initatives to enhance the JGI’s preeminence as a national resource. Members report to the JGI Director. …
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Natural Prodcast Episode 6: Marc Chevrette
… Canada. I just got back from a conference in Canada on antimicrobial resistance sponsored by the Garner foundation. And … in the lab of Cameron Currie. They work primarily within the “fungus growing ant” system where there is a … and actinomycete genomes, and trying to find the needle in the haystack when it came to the molecules of …
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Natural Prodcast Episode 18: A CSP Primer
… around that. Specifically, we’re going to talk about JGI’s Community Science Program , or CSP, which is the main … (that’s LBL), the National Lab where JGI is located. And within the DOE is BER, which stands for Biological and … the user programs at the JGI, and I’m also the head of the microbial genome program. And I’m a scientist here. And have …
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Natural Prodcast Episode 16: Marcy Balunas
… tell us about this squid-microbe relationship. Or is it a microbial community with microbial community relationship?  … beneficial then to have secondary metabolism in proximity within the genome so that things can transfer.  Plants are a … do it in a way that makes sense. And I always call this the needle in the Haystack. Because if we have 10,000 features …
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FICUS
… applications will focus on high-risk/high-payoff proposals within the focused topic areas that can be completed on an … free to the PI by the Department of Energy’s funding of the JGI. There is no cost to the user and no granting of funds. … All data is made publicly available in accordance with  JGI’s Data Policy . In cases where the JGI provides …
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Products
… The JGI has diverse capabilities in: DNA and RNA sequencing, … a description of the product and deliverables as well as target cycle times from sample receipt to completion of … is provided for all sequencing products below. In addition, JGI will submit raw sequence data to  SRA at NCBI once the …
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New Lineages of Life Group
… Cataloging Earth's microbial lineages through advanced genomic techniques and … reveal new lineages and functional capabilities in the microbial world. … A.I., Mars Brisbin, M., Hu, S.K. et al. (2024) “ Missing microbial eukaryotes and misleading meta-omic conclusions …
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Partnerships: Adopt-A-Genome
… a Genome” is an informal program for faculty to “claim” the JGI’s unpublished microbial genomes, with the expectation that faculty will … by the Joint Genome Institute, builds upon thousands of microbial genomes that have been sequenced by the JGI though … up-to-speed with some of the latest developments in microbial genomics, metagenomics, and computational biology, …
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DOE Metrics
… Illumina and PacBio sequencing platforms. **Operating Hours target is based on 98% of the total available hours.   FY 2025 DOE Metrics There were 2,627 unique* JGI users in FY2025 , which includes Principal Investigators … Q1 – Report on new computational developments for improving microbial, metagenomic, or plant genome assemblies. …
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Natural Prodcast Episode 20: Brian Bachmann
… So I built a lab to do that. And then yes, we had several targets– mechanistic enzymology targets and biosynthetic … of thought with that. So some people are interested in cave microbial– people are interested in the more extreme … that the field starts to merge with the synthetic biology community, with the metabolic engineering community because …
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