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Microbial Program
… analysis techniques to explore the vast and diverse world of microbes. Studying bacteria and archaea, including those … RNA sequencing and epigenomics. Expansion of sequence space:  The JGI generates reference genomes from diverse …
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Mission
JGI Mission As a U.S. Department of Energy Office of Science user facility supported by the … Berkeley Lab, leased laboratory and office space in a light industrial park in Walnut Creek, California, to … to understand biogenic contributions to the global nutrient cycles, as well as atmospheric particle formation and …
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Natural Prodcast Episode 15: Katherine Duncan
… here today, and we wanted to talk to her about a whole list of things. So we have a Scripps background shared together, … I’d never poured a Petri dish. I didn’t know what a thermocycler looked like. I was imagining some massive contraption … this. And then you’re biasing your chemistry viewpoint by polarity. And you’re only getting a subset of the chemistry …
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Natural Prodcast Episode 7: Ben Shen
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … types of enediyne molecules can bind to different places, but then the ring opening can cause all kinds of crazy … right? That’s the flavor of monoterpenoids. The very light natural product that gives you this fresh scent of the …
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Natural Prodcast Episode 1: The Primer, Part 1
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … to help them solve those problems. It’s a fantastic place to work, and this is the best job I’ve ever had. So, ok, … pathways of pink and teal, and Dan pointed out the Krebs cycle to me earlier – I kind of see it. DAN: So what we’ve …
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Metabolomics Program
The JGI’s Metabolomics Program works to uncover the roles of small molecules in biological systems, linking them with genomic data to enhance our understanding of genome science, organisms, and ecosystems at the … processes, development of high performance plants and microbes, and understanding microbiome interactions. The  …
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FICUS
… for researchers to request the capabilities and expertise of multiple DOE National User Facilities in one research … submits a proposal for consideration in the next review cycle. Initiate a full proposal by logging into the  EMSL … is written into a Statement of Work document. … Shining a Light: Advanced Photon Source Capabilities for FICUS …
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Natural Prodcast Episode 19: Bill Fenical
… for you here today. We got the opportunity to talk to one of the real legends of natural products, Professor Bill … and legendary natural products people– he’s making a face. Talking to us today is Bill Fenical from Scripps … you think about the fact that, when plants and animals and microbes evolve, they evolve to make molecules that improve …
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Webinars on Offerings & Capabilities
Below are a list of webinars that can help you through the submission process … covering how to use our data portals here.  … … Shining a Light: Advanced Photon Source Capabilities for FICUS … Research shows researchers how to tap into the capabilities of the Advanced Photon Source when applying to the FICUS …
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Natural Prodcast Episode 23: Aaron Puri
… … DAN: Hey, everybody. Welcome back for another episode of Natural Prodcast. Right now I’m working on this the … tundripaludum is my favorite and is again, maybe highlighting the people-centric aspects of the broader field and … not going to be able to make enough to adhere to your surface. And so you’re going to have a huge fitness disadvantage …
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Natural Prodcast Episode 11: Marnix Medema
… … Dan Udwary: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … to thinking of, like someone crashing at someone else’s place. OK. That helps me. Dan Udwary: Congratulations. Alison … are a few other efforts maybe that are out there and doing slightly different approaches, but antiSMASH has become the I …
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Partnerships: Adopt-A-Genome
… work with undergraduates in the analysis and publication of the claimed genome sequences. This opportunity, provided … IMG/M provides data and tools via a graphical user interface, so no programming knowledge and no dedicated compute … analysis. So they're getting research experience "light" and... they're getting a publication at the end. " — …
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