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Plotting a Model for Virus-Host Warfare Deep Below Ground
They are abundant representatives of deep subsurface ecosystems. A team of researchers described how the viruses … Earth’s surface is reconstructed by combining a study of microbial communities (metagenomics) and a chemical … carbon which can serve as a food source for other microbes into the environment. Summary In J. R. R. Tolkien’s “The …
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Natural Prodcast Episode 11: Marnix Medema
… it will be really good to maybe start with how did you get into this field? How did you get into natural products? … all based on antiSMASH results. And so if you want to do deeper analysis on things, then you’re staying in the “BiG” … IMG kind of hooks into IMG’s data. IMG being Integrated Microbial Genomics at JGI, a large data set of bacterial …
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Single Cell Research Group
… in 1985, which highlights our skewed understanding of microbial metabolism towards a minority of cultivated … begin filling this gap. A primary goal is to get  insights into the coding potential of candidate phyla  to decipher … R., Rubin E.M., Hugenholtz P. & Woyke T . Insights into the phylogeny and coding potential of microbial dark …
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CalTeach
… program for undergraduate majors interested in developing a deep understanding of STEM teaching & learning. Their …
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Natural Prodcast Episode 15: Katherine Duncan
… question. Kate, can you tell me the story of how you got into secondary metabolites? Kate Duncan: So I always liked … when I was quite young. I just turned 17 when I enrolled into University, so I guess I must’ve been around about 18. … And sometimes, in terms of biological activities– like antimicrobial or something– sometimes a little difference is …
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Soil metabolomics: Deciphering underground metabolic webs in terrestrial ecosystems
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Natural Prodcast Episode 16: Marcy Balunas
… tell us about this squid-microbe relationship. Or is it a microbial community with microbial community relationship?  … work we’ve determined that the ANMG deposits those bacteria into the jelly coat of the eggs. And so these eggs are laid … this bacteria. And so the ANMG is depositing the bacteria into the jelly coat to protect the eggs as they’re …
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Fungal & Algal Program
This research helps translate their genomic potential into practical applications, including sustainable biofuels, … Program aims to streamline genome analysis workflows for microbial eukaryotes, build fungal and algal pangenomes, and … improve understanding of how fungi and algae contribute to ecosystems and industries. The program also explores …
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Natural Prodcast Episode 7: Ben Shen
… for every episode we put out. I actually put a lot of time into preparing those transcripts, so I hope somebody’s going … genomic revolution, to me, as a natural part chemist for microbial natural product, is that I love microbial natural … natural products or biosynthetic chemistry and want to dive deep on the topic, or just want to take a look at several …
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Accelerating Metagenomics Discoveries with Deep Learning
… with 86 participants in an online workshop to harness deep learning for metagenomic data.  Metagenomic data, or … learning, data is passed through algorithms organized into multiple interconnected layers. The architecture of … Lab’s Biological Systems and Engineering), to assign microbial taxa (Andrew Tritt of CRD and, independently, Ying …
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New Research Sheds Light on Diversity in the Deep Sea
Microbial communities living near hydrothermal deep-sea … survive in very hot, high-pressure and chemically-rich ecosystems. This means they hold clues for understanding how … hydrothermal fluid. Eventually, that fluid is expelled back into the ocean through vents at temperatures that can exceed …
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Products
… small genes assembled to less than 5kb in length, cloned into vector of choice Glycerol stock of sequence verified … small genes assembled totaling 5-10kb in length, cloned into vector of choice Glycerol stock of sequence verified … physical separation of a biologically relevant unit from a microbial community, such as a microcolony, microbial …
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