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Assessment of the Deepwater Horizon oil spill impact on Gulf coast microbial communities
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Metagenome, metatranscriptome and single-cell sequencing reveal microbial response to Deepwater Horizon oil spill
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Natural Prodcast Episode 4: Nancy Keller
… use natural products necessarily. Fungi are large. They’re microbes, but they’re large microbes. And they have all … genes when I first started out, because that wasn’t on the horizon. It just started. And I guess some of the challenges … so, so cheap to sequence. Right now, for our particular projects, we’re not doing that right now, but we might. I …
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Identifying the Microbial Cleanup Crew at a Superfund Site
… sites which are hazardous waste areas that require cleanup and long-term monitoring. The DOE has been similarly … to bioremediation efforts for decades. Identifying resident microbes that can help bioremediate toxic substances has led … to encourage their growth. In this instance, vegetable oil was injected into a specific type of food that was in …
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Single-cell genomics reveals features of a Colwellia species that was dominant during the Deepwater Horizon oil spill
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Metagenome Program
The Metagenome Program uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work … to information regarding genome and metagenome sequencing projects, and their associated metadata, around the world. … …
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Natural Prodcast Episode 21: Elizabeth Parkinson
… pathways, which led her to a successfully funded JGI CSP project. And we also got to talk about work at her … or online catalog, I guess. So we've also been able to get soils from Purdue campus itself and been able to actually … fun that we've started that is a different subject is from microbes to medicine labs. So this is-- we've been working …
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Natural Prodcast Episode 16: Marcy Balunas
… activity. So the chemistry and function really of those microbes that live there.  And in our work we’ve determined … environments, where there are more bacteria there is more horizontal transfer. And so it’s beneficial then to have … more inclusive in natural products. But it doesn’t always boil into like trickle up into the faculty ranks. So–  …
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Data Policy
… and released by the US Department of Energy (DOE) Joint Genome Institute (JGI) are subject to the following Data … for the remainder of this policy) produced through all user projects accepted FY22 and later through the Community Science Program (CSP), Facilities Integrating …
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Natural Prodcast Episode 18: A CSP Primer
UDWARY: It’s been a while, but Natural Prodcast is back again for another round of episodes. If you stick around for … is kind of like a CSP, but you would be proposing a larger project that requires the work of two or more DOE user … where smaller proposals may be a fit. Still not 20 many microbes. We still we work in plates, right? We’re a high …
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CSP Large Scale Call
Program Large Scale Call is focused on genomic science projects that address sustainable biofuel and bioproducts production, leveraging … approaches to unravel functional capabilities of plants, microbes and microbial communities, global carbon and …
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Natural Prodcast Episode 12: Nadine Ziemert
… miner and has been involved with the AntiSMASH and MIBiG projects. And I found her review in natural product reports on the evolution of genome mining and microbes with Mohammad Alanjary and Tilmann Weber to be a … of these environments? NADINE ZIEMERT: So we started with soil. But we also have, in collaboration with other people, …
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