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… then be used to submit proposals, sample and project metadata, and to access JGI tools and systems. … Go to the “ edit contacts ” page in … (citation: https://doi.org/10.1093/nar/gkaa898 ) Plants: Phytozome (citation: https://doi.org/10.1093/nar/gkr944 ) …

… support users, our efforts include developing computational tools for predicting biosynthetic gene clusters (BGCs), … cell- and cell free-based expression platforms, tools and data for deciphering regulatory networks, and refining … … The SMC provides complete sequence and annotation data for secondary metabolite biosynthetic gene clusters …

… fungal and algal pangenomes, and integrate multi-omics tools to enhance functional studies. These efforts seek to … sampling of fungi, laboratory analysis and genomics data exploration. … The Mycocosm web portal provides data access, visualization, and analysis tools for …

The program provides high-quality, large-scale genomic data to advance microbial research that drives sustainable … The program aims to generate high-quality genomic datasets, particularly for uncultivated microorganisms, by … available genomes from three domains of life. It provides tools for analyzing the functional capability of microbial …

… across at least two of the facilities, and generate datasets beyond what each of these facilities could generate … There is no cost to the user and no granting of funds. All data is made publicly available in accordance with  JGI’s … Environmental Sample Archives, Applying JGI and EMSL Omics Tools introduces the NEON resource, a network of field …

… or NPAtlas, a freely accessible natural products structure database, which is going to be just invaluable to the … we’re now very much – we’re interested in how we can build tools which will let us see the whole landscape of natural … lot in the past. This sort of idea of, “there’s a lot of data out there: let’s put it together”. So you have – at …

… of Science through high performance computing (HPC) and data analysis.  The DOE Systems Biology Knowledgebase ( KBase ) integrates systems biology data and tools to help predict biological function.   To jointly …

… can help researchers assess virus sequence fragments and data quality. The Science Through advances in sequencing … is challenging and often results in highly fragmented data, which limits the ability of researchers to accurately … to this point, there has been a lack of fast and accurate tools for researchers to assess the quality of …

… technology company Truss has resulted in the JGI Data Portal , a pilot download experience accessible from JGI’s plant portal Phytozome . Although the Data Portal is currently only … — it provides access to all of JGI’s genomic databases and tools,” noted  Kjiersten Fagnan , JGI’s Chief Informatics …

… the idea of taking all the different natural products data that there is and putting things, coalescing them, so … basic questions that we can only really address with bigger data sets and integrated data sets. So yeah, in terms of, I … that I’ve appreciated since starting my own group is these tools, in terms of looking at the chemistry produced by …

Energy Research Scientific Computing Center (NERSC) and data infrastructure projects—the DOE Systems Biology Knowledgebase (KBase) and the National Microbiome Data Collaborative (NMDC)—to provide access to datasets, workflows, and tools to seamlessly expand data functionality. Close …

SMC – which is the new Secondary Metabolism Collaboratory data portal I’ve been working on with my colleagues Drew … of always working on natural products but just different tools and how to really access and manipulate these pathways … our users. So for those who are familiar with JGI’s IMG data portal , the Integrated Microbial Genomics, there was a …