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SMC – which is the new Secondary Metabolism Collaboratory data portal I’ve been working on with my colleagues Drew … of always working on natural products but just different tools and how to really access and manipulate these pathways … hypersaline lakes– and start comparing and contrasting systems and then also comparing to the marine environment, …

… of Science through high performance computing (HPC) and data analysis.  The DOE Systems Biology Knowledgebase ( KBase ) integrates systems biology data and tools to help predict biological function.   To jointly …

… (meta)genomic, (meta)transcriptomic, and functional genomic data and serving them to users via the Integrated Microbial Genomes & Microbiomes (IMG/M) system. Research Team    … The … Genomes group is focused on:  Developing state-of-the-art data processing and analysis pipelines for the …

… now, just because of the ways that we can generate data. So, obviously, it’s very apparent to us here at the … little vague to me. What do you mean by putting a bunch of tools in one package? DAN UDWARY: Oh, sure. So if I wanted … peptides, remember, are big, complicated enzyme systems that really just exist to pull an amino acid out of …

… train students and professors in laboratory techniques and data analyses compile original data for improving fungal … comparative analysis.  MycoCosm provides data and tools via a graphical user interface, ensuring that no … and potential applications. … The Department of Energy Systems Biology Knowledgebase (KBase) is involved in the …

The Joint Genome Institute's DNA Synthesis Platform capabilities … group and focused on new technologies and optimizing tools — including strain engineering — to make them more … Synthetic Biology Informatics Group : a team that develops data science tools for workflow management and novel …

… across at least two of the facilities, and generate datasets beyond what each of these facilities could generate … areas.  Initiate a new LOI by logging into the   EMSL User Portal  and clicking “Submit a Proposal/LOI” in the … Environmental Sample Archives, Applying JGI and EMSL Omics Tools introduces the NEON resource, a network of field …

…   The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a national user facility located … collaboration with partner organizations such as the DOE Systems Biology Knowledgebase and the National Microbiome Data Collective.        … Learn more about our work at the …

Looking for information on our software, including BBTools ? Click to find that on our archive site.  …

Biological and Environmental Research program, the Joint Genome Institute provides advanced genomic capabilities, large-scale data and professional expertise to support the global … in studies of complex biological and environmental systems. We optimize our service to the community through …

… or NPAtlas, a freely accessible natural products structure database, which is going to be just invaluable to the … has gone on, the more we’ve become interested in sort of systems level approaches. So rather than asking one question … we’re now very much – we’re interested in how we can build tools which will let us see the whole landscape of natural …

… support users, our efforts include developing computational tools for predicting biosynthetic gene clusters (BGCs), … cell- and cell free-based expression platforms, tools and data for deciphering regulatory networks, and refining … by their native hosts. We are developing cell-free based systems to express BGCs that alleviate the constraints of …