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Metabolomics
… technologies at the JGI by identifying the actual molecules present in an environment that influence system behavior. … rich metabolite profiles from diverse biological and environmental samples using advanced liquid chromatography … experimental samples, including organisms (e.g. microbes, fungi, plant), media in which they grow, as well as …
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Metagenome Program
… The Metagenome Program uses advanced sequencing technologies to decode the … approaches to assess microbial activity across ecosystems.  By studying microbial communities and their interactions, … potential, with implications for energy production, environmental sustainability, and many other applications. …
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Special Initiatives & Programs
… Overview The JGI provides sequencing, synthesis, and targeted metabolomics support for DOE-BER funded awards, including awards funded … negotiation with the JGI.  Investigators with grants funded by DOE-BER requiring support from the JGI may  submit … that is relevant to DOE missions.  Learn more about this opportunity . …
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Mining New Frontiers: The Critical Minerals and Materials Joint Call
… have launched a joint Critical Minerals and Materials proposal call . This represents a unique opportunity for researchers to request the … Access to the Molecular Foundry and use of JGI capabilities is free. The JGI supports remote users. Users … to the user. Most users of the Molecular Foundry work side-by-side with our scientists at Berkeley Lab. Access to the …
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FICUS
… Integrating Collaborations for User Science (FICUS) call represents a unique opportunity for researchers to request the capabilities and … beyond what each of these facilities could generate by itself.   Accepted projects must address or be otherwise … Proposals for the annual FICUS call with EMSL begin with a …
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Genome Insider
… The Genome Insider podcast brings listeners into the science that the JGI makes possible. Each episode, host Menaka Wilhelm interviews … into their work on all kinds of organisms, from plants and fungi to microbes and viruses. Listen in to explore the data …
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Viral Genomics Group
… however they do so under strong constraints exerted by viruses. Research in the viral genomics group aims at improving our collective understanding of … and evolutionary parameters driving virus:host dynamics in environmental microbial communities. This involves both …
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Single Cell Research Group
… taxa of interest. One such effort is targeted at environmental cells that are from candidate phyla, major branches in the phylogenetic tree without … The “Great Plate-Count Anomaly” first described by Stanley and Konopa in 1985, which highlights our skewed … Phylogenetic diversity estimates show that the gap between …
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Natural Prodcast Episode 5: Brad Moore
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural … genes to that toxin, but it’s opened up this whole area of environmental health that we’re now working on. And this … metabolomics, and natural products in plants, fungi, and microorganisms. If you want to collaborate, let …
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Data Policy
… Data produced and released by the US Department of Energy (DOE) Joint Genome Institute … (FICUS) initiative, Director’s Science (DS), Biological and Environmental Research Support Science (BERSS), or Bioenergy … Embargo : A period in which data is not publicly available in JGI …
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CSP Large Scale Call
… The Community Science Program Large Scale call is focused on genomic science … biodesign — questions of relevance to DOE’s Biological and Environmental Research (BER) program missions .  While … merit, DOE mission relevance, proposed data usage by the applicant/community, and track record of the …
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Partnerships: Myco-Ed
… (Myco-Ed) is a Course-Based Undergraduate Research Experience (CURE) that consists of coordinated hands-on experiments across fungal biology teaching labs. The purpose … genome sequencing of new fungal species.  Students collect fungi, sterilize tissue, isolate genes and more. The …
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