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Mission
… program in the DOE’s Office of Science. In December 2019, the JGI relocated to the newly-built Integrative … development. Develop an understanding of microbial and fungal metabolism necessary to design communities, new … scientific discovery. Projects focused on organisms for comparative purposes, on model systems for microbe-microbe …
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User Programs
… to the user and no granting of funds.   Proposal Call FICUS CSP Large Scale CSP New Investigator CSP Functional Genomics Status CLOSED CLOSED ONGOING ONGOING …
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Viral Genomics Group
… interactions. ISME J.   15 , 1569–1584 Roux, S. et al. (2019) Cryptic inoviruses revealed as pervasive in bacteria … biomes. Nature Microbiology. 4 , 1895–1906 Roux, S. et al. (2019) Minimum Information about an Uncultivated Virus Genome …
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Frequently Asked Questions: Proposal Submission
… in. All proposals must be written in English. … The CSP and FICUS calls are open to both domestic and … Agreement must be signed before work can begin, and all CSP proposals are subject to JGI policies on Data Release and Publication .   Except for applicants to the CSP New Investigator call, investigators may have existing …
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Plant-Microbial Interactions Group
… diversity of cell types and associated organisms, including fungal and bacterial symbionts, detrimental microbial … ‘omics methods. Here we were able to capture both plant and fungal expression patterns in root cross-sections. … … 10.1073/pnas.1907500116 10.1016/j.celrep.2019.04.054 10.1371/journal.pbio.2002860 … Postdocs: Margot …
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Natural Prodcast Episode 4: Nancy Keller
… episode is our conversation with Nancy Keller, a fantastic fungal natural products researcher from the University of … that you are the first person we’ve had on to talk about fungal natural products. I can say that I started in fungal natural products – I did my Ph.D. with Craig Townsend …
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Natural Prodcast Episode 5: Brad Moore
… linear, like Streptomyces , but circular. 10% of the genome encoded natural product pathways. Dan: Yeah, that’s kind of … with, and, turns out, that high repeat sequence area encoded a polyketide synthase, with many modules of high … JGI projects over the years starting with, you know, the CSP that we did and then leading up to today to some …
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Partnerships Development Team
… industry engagement through three primary routes:  … The CSP provides the scientific community at large with access …
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Natural Prodcast Episode 10: A Primer on Genome Mining
… of a gene that you knew was probably biosynthetic that encoded for some secondary metabolism, then you would … it has a really interesting biosynthetic pathway because fungal genes are cool. And if you like fungal genes, you … bacteria, because it is so easy to sequence their genomes comparatively to especially plants. So yeah, so from there, …
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New Lineages of Life Group
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Characterizing Communities: JGI Announces Latest CSP Portfolio
… said Susannah Tringe, JGI User Programs Deputy. “These new CSP projects accelerate our efforts to characterize … focus area was inter-organismal interactions, and two fungal proposals focus on symbiotic relationships. Jessie … to thrive in drought conditions. The proposal targets the CSP focus area in plant microbiomes, as well as those in …
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10 From JGI on the 2019 Highly Cited Researchers List
… the IP & Science arm of Thomson Reuters, has released their 2019 list of Highly Cited Researchers , which includes 10 affiliated with the JGI . The 2019 list focused on Highly Cited Papers, defined in the … to: Project Manager Kerrie Barry, Cross-Field Category Fungal and Algal Program head Igor Grigoriev , Plant & …
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