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Frequently Asked Questions: Proposal Submission
… Review the list of open calls ; click on the call link to see specific details … The CSP and FICUS calls are open to both domestic and international applicants from any … Agreement must be signed before work can begin, and all CSP proposals are subject to JGI policies on Data Release …
Learn more
Examples: Successful LOIs & Submissions
… Large-Scale Call, as well as successful submissions to our CSP New Investigator, CSP Functional Genomics, and Facilities Integrating … CSP Large Scale Proposal #1 … CSP Large-Scale LOI #1 … CSP Large-Scale LOI #2 … CSP New Investigator Submission … CSP Functional Genomics Submission …
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Fungal & Algal Program
… and bioproducts. By sequencing and analyzing the genomes of these organisms, the program investigates the … culture collections to produce hundreds of diverse algal genomes, which will be made accessible through the PhycoCosm … for microbial eukaryotes, build fungal and algal pangenomes, and integrate multi-omics tools to enhance …
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FICUS
… on an accelerated timeline as compared with the standard CSP projects. In addition, they must utilize a broad range … The FY23 FICUS Open Call for Proposals describes the resources available … of field research sites designed to collect long-term open access ecological data. Through FICUS, NEON will …
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Single Cell Research Group
… in the strongly biased representation of sequenced genomes in the public domain, the bulk of which belong to … relationships and to provide valuable reference genomes in under-populated areas of the tree of life, as reference genomes are critical to serve as phylogenetic anchors for …
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Natural Prodcast Episode 7: Ben Shen
… you heard me talk about JGI’s Earth Secondary Metabolome initiative, and our collaboration with Ben is an important … molecules can bind to different places, but then the ring opening can cause all kinds of crazy havoc depending on what … well. One is to do DNA sequencing. So upon sequencing many genomes, now we don’t have to, as in the past, go randomly …
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Natural Prodcast Episode 4: Nancy Keller
…   DAN: Got it.    NANCY: And this is really to complete the genomes, and I’m really thankful for this. It sort of goes … do Illumina sequencing and we can get – thousands of fungal genomes are floating out there – some are private – that, … with a fungus than putting it into a bacterium. It would open the doors to be able to start looking at some of these …
Learn more
Industry Engagement Program
… the JGI, through its Genesis Mission. Launched in 2025, the initiative aims to accelerate scientific discovery, … Science Program, the JGI sequenced and characterized 270 genomes of the Clostridium genus for LanzaTech, information …
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Partnerships: Adopt-A-Genome
… for faculty to “claim” the JGI’s unpublished microbial genomes, with the expectation that faculty will work with … Joint Genome Institute, builds upon thousands of microbial genomes that have been sequenced by the JGI though not … development and adoption of classroom modules Currently 206 genomes have been selected with 11 published manuscripts …
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Natural Prodcast Episode 14: Nigel Mouncey
… to think about other applications of the product that now open up because you’ve been able to create more product or … us launching our second metabolites group, we launched an initiative at JGI which is really a pilot in bringing … NIGEL MOUNCEY: Yeah, so we put out a strategic plan in 2018. And in building that plan, we thought about secondary …
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Viral Genomics Group
… While an ever-increasing number of phage and virus genomes have been assembled and reported from metagenomes, our understanding of the impacts of these viruses … as a driver of viral infection cycle in wild populations of green sulfur bacteria with long standing virus-host …
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Metagenome Program
… Program uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work … catalog of viral, microbial, and microeukaryote genomes and mobile genetic elements, linked to custom … environments. Integrating metatranscriptomes and metagenomes can, for instance, deepens our understanding of …
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