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Frequently Asked Questions: Project Management
Tijana Glavina del Rio , Danielle Graham , or Miranda Harmon-Smith DNA Synthesis projects: Miranda Harmon-Smith … . The PI and all authorized users can also generate various reports. Access the reports by searching for projects in the … IMG (citation: https://doi.org/10.1093/nar/gkaa939 ) Metagenomes and Single Cells: IMG/M   (citation: …
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Prokaryote Program User Advisory Committee
… is chartered to offer advice, guidance and counsel on the effective management and strategic objectives of the microbial and metagenome programs and report back to them. The Committee … is chartered to render advice, guidance, and counsel on the effective management and strategic objectives of the …
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Metagenomic Discovery of Biomass-Degrading Genes and Genomes from Cow Rumen
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Microbial Program
The JGI’s Microbial Program focuses on using cutting-edge sequencing, annotation and analysis … to explore the vast and diverse world of microbes. Studying bacteria and archaea, including those associated … capability of microbial communities based on their metagenome sequence, in the context of reference isolate …
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Natural Prodcast Episode 11: Marnix Medema
… about natural products and the science and scientists of secondary metabolism. Hey there, and welcome back to Natural … what was this bacterium, and why did your group want to study it? Marnix Medema: You mean the PhD project that I … primer episode, we talked about genome mining through some metagenome associated genomes. And yes, antiSMASH is …
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Natural Prodcast Episode 2: The Primer, Part 2
Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Hi, again. This is Dan, and you’re … secrete a lot more things than people do…? Although I don’t study people so maybe I’m wrong. But yeah, I mean, because I … them as very small fungi. And this came from a growth on a cow’s cheek. Historically, before antibiotics were common, …
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Progress Reports: 2002–2020
… cards below to view downloadable pdfs of previous Progress Reports from the Joint Genome Institute.  … FY20 Progress … Progress Report … FY06 Progress Report … FY02–FY05 Progress Reports …
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Natural Prodcast Episode 13: Francisco Barona Goméz
… about natural products and the science and scientists of secondary metabolism. Hey everybody, this is Dan with episode 13 of National Prodcast. This continues our little section on international genome miners, …
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Natural Prodcast Episode 10: A Primer on Genome Mining
… about natural products and the science and scientists of secondary metabolism. Welcome back for our second season of … like, and then you could characterize it. The classical study that demonstrated this is Challis et al, Chemistry and … if an order is uncultured (blue; represented only by metagenome-assembled genomes or MAGs) or cultured (gray; …
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New Lineages of Life Group
Our research is focused on the discovery and characterization of novel bacterial, archaeal and eukaryotic microbes and … deeply branching in the Gammaproteobacteria. Scientific reports. 5 (1), 1-10 Schulz et al. (2014) Life in an unusual …
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Natural Prodcast Episode 16: Marcy Balunas
… … DAN: Hey Marcy!  ALISON: Hey Marcy?  MARCY: Hello. How’s it going?  DAN: Good. … now?  MARCY: Sure. So my lab has really converged on the study of host-microbe chemistry. And the interactions– As … Marcy. So I was wondering, how did you get interested in studying natural products?  MARCY: That is a great question …
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Natural Prodcast Episode 20: Brian Bachmann
… … DAN UDWARY: Hey everyone and welcome back to a new session of Natural Prodcast. … hold me accountable and yell at me if I slip again. My JGI coworkers are way too nice to yell at me, so that’s gonna be … just now switching from intermicrobial interactions, studying intermicrobial interactions by imaging interactions …
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