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Natural Prodcast Episode 16: Marcy Balunas
… know that that’s ever necessarily like a good description of anyone because chemistry means a lot, especially when … of the international cooperative biodiversity group (ICBG) based in Panama and was dual there and at Scripps where I … metals with our cultures.  And we see some very interesting changes in the chemistry when we– so if you use too much of …
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Natural Prodcast Episode 23: Aaron Puri
… DAN: Hey, everybody. Welcome back for another episode of Natural Prodcast. Right now I’m working on this the … guy named Matt Bogyo in grad school synthesizing activity based probes which are basically molecules that will … the bacteria part of that. And so I decided to completely change gears and go and do a postdoc with a woman named Mary …
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Natural Prodcast Episode 9: Roger Linington
… DAN: Welcome back for episode 9 of Natural Prodcast. This week, Alison and I talk to Roger … NPAtlas, a freely accessible natural products structure database, which is going to be just invaluable to the natural … more to be gained than just subject matter, by making that change. So I went to the University of British Columbia, in …
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Mission
… JGI Mission As a U.S. Department of Energy Office of Science user facility, we provide advanced genomic … data and professional expertise to support the global research community in studies of complex biological and … and manufacturing. Genomic science lies at the heart of biology, providing the foundational knowledge to …
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Natural Prodcast Episode 5: Brad Moore
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … a relatively small genome, about five and a half million base pairs. It was not linear, like Streptomyces , but … the group has, I guess… Maybe my philosophy has sort of changed over the years. And I think maybe over the last 10 …
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Metabolomics Program
… The JGI’s Metabolomics Program works to uncover the roles of small molecules in biological systems, linking them with … It also enables exploration of energy and nutrient exchange, as well as microbial and plant responses to … computational tools, the program supports foundational research related to soil nutrient cycling and health, …
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Natural Prodcast Episode 1: The Primer, Part 1
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … see things that maybe aren’t real, and so it’s thought that based on historical records and weather recordings of the … slash natural product. And, can you just use that interchangeably? DAN: Sure. I mean, maybe — First, we can say, if …
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Polar Phytoplankton Need Zinc to Cope with the Cold
… Antarctic algae need their vitamins; zinc fuels some of their most important functions. Even in the chilly waters … inhabit their frigid environment, Mock pointed out that as climate change warms polar waters, changes in trace metal … sequencing and computational analysis that enable systems-based scientific approaches to these challenges.  DOE’s …
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Natural Prodcast Episode 10: A Primer on Genome Mining
… DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … of secondary metabolism. Welcome back for our second season of Natural Prodcast. This first episode up is another … families of genes that it searches for and uses a rule-based system that classifies the things that it finds into …
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Natural Prodcast Episode 6: Marc Chevrette
… DAN: You’re listening to the US. .Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … were, what they were doing in these genomes and how they change over time. And yeah, I mean, that was let’s see, … they’ve got really high GC content, which means their base usage is skewed, and that can mess with some of the …
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Natural Prodcast Episode 24: Jackie Winter and SMC
… dust hotspots on the lake. So the lake is [INAUDIBLE] with climate change. I mean, right now– like last year, we had a great … InterProScan. And all of those have ended up in the SMC database. There’s a web front end for it, and it’s just a … On this bonus episode of Natural Prodcast, it’s the Self Promotion Episode! Dan …
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From Stress to Growth: The adaptive mechanisms of algae in changing Arctic waters
… ability to adapt to stress and rapid environmental changes. Researchers were able to identify specific genes … can explore how to better manage the growth, yield and climate resilience of algae — for potential use as biomass … the primary producers in the marine food web, forming the base of the food chain and providing energy for a slew of …
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