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… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the … curing every disease and helping you sleep at night (I’m not sure if that’s a real example), she’s talking about … on, let me know! All right, so here we go. This is episode one of the Natural Prodcast Primer!  — DAN: Hey, Alison.  …

… The Metagenome Program uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work … and characterizing microbial diversity, work in the Metagenome Program uses several experimental approaches to … such as carbon cycling, nutrient cycling, and energy flow. One of the key goals of the Program is to develop a deeper …

… UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural … the pandemic in Europe. So if there are any kind of dated references to the news, that’s why. But it was a really fun … too. DAN UDWARY: Oh, yeah. ALISON TAKEMURA: My big headphones. DAN UDWARY: I’m sitting on my bed in Paris, pointing a …

… a single investment will be reused for further science.  NOTICE The Data Portal application has replaced the JGI Genome Portal . Book a session via the appointment calendar … Download plant, algal, fungal and microbial genomes and metagenomes — top-quality genomic data, open to …

… DAN: Hey, everybody. Welcome back for another episode of Natural Prodcast. Right now I’m working on … department at the University of Utah, so that makes him one of Jackie’s colleagues. Aaron is doing some cool stuff … And it actually was jumping onto the I ntegrated Microbial Genomes and Metagenomes, the IMG platform that JGI has that …

… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the … suggest you go back and check the first episode out. This one continues the introductory conversation between myself … of natural products and the state of the field today. So, not as much of a preamble this time. Let’s jump right in. — …

… DAN UDWARY: Hey, everyone! Welcome to the “Self Promotion Episode” of Natural … one that wanted to get out there as soon as possible. Not one of our normal interviews, but instead it’s two … Breaking Bad, I guess. But no, you trained me in how to genome mine, so thank you for that. And you had to put up …

… The Joint Genome Institute and the Molecular Foundry have launched a … and expertise of both national user facilities in one research proposal.  Submit research proposals  here that … free of charge, including data such as fully annotated genome assemblies or differential gene expression results. …

… So I always liked science in school. I wouldn’t say I was one of these people that wants to study oceanography and was … incredibly enthusiastic and gave me a bunch of books, but not books on marine natural products, as such, but things … was really before– or kind of around about when the first genome sequencing was done. But natural products– marine …

… metabolomics data is submitted to the  MassIVE repository . Not all products are available for all proposal calls.   … average base outputs for each product. For custom requests not on this list, or to discuss experimental design for a … JGI  Science Program leads to discuss available options. Note: In 2021, we conducted an extensive internal product …

… they can modulate host metabolism, gene expression and phenotype. We have recently identified resident bacteriophages … rhizobacterium (PGPR) Pseudomonas simiae WCS417. One suggested function of these phage genes is the … single-cell atlas comprising Sorghum, Switchgrass, and Brachypodium datasets. We recently profiled the association …

… Am fine. I live in a pandemic so I’m no different than anyone else.  DAN: Yeah. I mean fine in pandemic adjusted terms … – I guess that maybe you could say the gut is, kind of. But not the same way this is designed specifically to house … almost never Actinomycetes. And so when we look at their genomes we don’t get the same kind of information that we …