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… an accelerated timeline as compared with the standard CSP projects. In addition, they must utilize a broad range of … of these facilities could generate by itself.   Accepted projects must address or be otherwise mission-aligned, but … of Intent (LOI) from a researcher, briefly describing the project motivation, experimental design, capabilities to be …

… and bioproducts. By sequencing and analyzing the genomes of these organisms, the program investigates the … culture collections to produce hundreds of diverse algal genomes, which will be made accessible through the PhycoCosm … portal. The Fungal & Algal Program aims to streamline genome analysis workflows for microbial eukaryotes, build …

… Research in the Eloe-Fadrosh group focuses on using genome-resolved metagenomic approaches to identify and … computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial … and reconstruct metabolic properties encoded within those genomes. Our aim is to more fully capture microbial and …

… The mission of the Joint Genome Institute is to serve the scientific community as a … and readiness to begin work, checking such factors as genome size, polymorphism level, sample quality and … to DOE for final approval.  Following DOE approval, project managers negotiate project specifics with PIs …

… I talk about SMC – which is the new Secondary Metabolism Collaboratory data portal I’ve been working on with my … Breaking Bad, I guess. But no, you trained me in how to genome mine, so thank you for that. And you had to put up … DAN UDWARY: Nothing to be sorry about. Yeah, no, your project was really cool. The vanadium haloperoxidases are …

… The Joint Genome Institute and the Molecular Foundry have launched a … free of charge, including data such as fully annotated genome assemblies or differential gene expression results. For DNA synthesis projects, JGI ships physical materials like expression … DOE Critical Materials Assessment . While we expect most projects will focus on one or more elements in the CMM …

… accessible, AI-ready large-scale data repositories for genome information with analysis tools for mining and … Science Program, the JGI sequenced and characterized 270 genomes of the Clostridium genus for LanzaTech, information … Berkeley Lab Biosciences Area on a Strategic Partnerships Project to study how methanotrophs — a class of microbes …

… contributions, ensure that all contributors to a research project are appropriately recognized and credited for their … facility result in scientific publications. JGI users and collaborators have the right to produce manuscripts for … assembly, analysis, annotation, verification, creation of genome browsers, etc. The users, collaborators, and JGI …

… While an ever-increasing number of phage and virus genomes have been assembled and reported from metagenomes, our understanding of the impacts of these viruses … filter, cluster, annotate, and bin viruses from metagenomes. mSystems 9:e00888-24. … al. (2019) Minimum Information about an Uncultivated Virus Genome (MIUViG). Nature Biotech. 37, 29–37. …

… information into biological function.  The emphasis is on projects leveraging JGI’s Biodesign and ‘omics capabilities to enhance understanding of gene and genome function, particularly those not readily achievable … general questions, please reach out to Christa Pennacchio, Project Management Office. For questions about the …

… pathways, which led her to a successfully funded JGI CSP project. And we also got to talk about work at her … exposure to working with Streptomyces, learning more about genome mining, as well as isolation and a little bit of … what molecule might bind them and then allow for their release from the DNA and transcription of biosynthetic gene …

… ; click on the call link to see specific details including project types supported, sample/capacity limits, and … eligible to submit proposals, or to be listed as co-PIs or collaborators.   JGI’s standard User Agreement must be … and all CSP proposals are subject to JGI policies on Data Release and Publication .   Except for applicants to the CSP …