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… The JGI’s Microbial Program focuses on using cutting-edge sequencing, annotation and analysis techniques to explore the vast … The Microbial Program focuses on using advanced sequencing technologies to explore microbial … with isolate collections to complete large-scale sequencing projects, including 10,000 Actinomycetota strains and 10,000 …

… the process needed to prepare and ship samples for sequencing by the JGI.  Additionally it includes instructions on … the process. If you have any questions, please contact your Project Manager or jgi-project[email protected] . … and quality has been the rate-limiting step for many projects at the JGI. The quality of the starting material is …

… The JGI’s DNA Synthesis Program supports a wide range of projects, from single-gene synthesis to the synthesis of entire chromosomes, advancing the development of biofuels, biochemicals and other … bioproduct applications. The program has completed over 70 projects, including gene synthesis, combinatorial pathway …

… Machine learning methods were applied on sequenced fungal genomes to classify gene families. The Science As a proof of … “learned” to identify data generated in part through the 1000 Fungal Genomes Project, including 55 newly-sequenced … of  Dothideomycetes genomes were conducted as part of the 1000 Fungal Genomes Project supported by the JGI Community …

… and a tool for predicting natural product structures from genomes. And I was writing grants furiously to try to get … the professor was actually quite enthusiastic about the project and he arranged funding to do it nonetheless from … are protecting the plants against pathogens. So usually fungal or oomycete pathogens. In this case they worked on a …

… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s unpublished microbial genomes, with the expectation that faculty will work with … Joint Genome Institute, builds upon thousands of microbial genomes that have been sequenced by the JGI though not …

… is kind of like a CSP, but you would be proposing a larger project that requires the work of two or more DOE user … for you, we sequenced thousands for you or thousands metagenomes. And I think also the quality that we provide. So for fungal and for a lot of our eukaryotic genomes, all our …

… for Episode 14 of Natural Prodcast . There’s been a lot going on, so I took a little break, but I’m hoping that from … And a little after that acquisition, I moved to another project. This time on vitamin C with a Gluconibacter .  And … normally run into or interact with in the course of your daily work.  DAN: Sure.  NIGEL MOUNCEY: I think an …

… fungi remain largely mysterious. Only about 200,000 fungal species have been named. Among those sequenced, … one of the world's most comprehensive collections of fungal genomes. A sweeping analysis published in Nature Reviews … for the next generation of scientists. Initiatives like our 1000 Fungal Genomes Project established crucial phylogenetic …

… and released by the US Department of Energy (DOE) Joint Genome Institute (JGI) are subject to the following Data Policy. It … for the remainder of this policy) produced through all user projects accepted FY22 and later through the Community … Embargo : A period in which data is not publicly available in JGI systems or …

… 35 countries. (Graphic: Neil Byers) The JGI launched the 1000 Fungal Genomes (1KFG) Project through a 2012 Community Science … 1KFG project on MycoCosm … Filling in the Plant Tree of Life … Fungal Dataset … Genome Insider …

… The JGI’s data stewardship expertise and infrastructure enable a broad community of scientists and engineers to leverage our data to develop new algorithms, models and tools in support of DOE mission priorities. Data discoverability … Download plant, algal, fungal and microbial genomes and metagenomes — top-quality …