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The Community Science Program (CSP) provides the scientific community at large with access to high-throughput … assemblies, gene annotations, and analyses available to the community at large. In most cases where the JGI provides …

When submitting sequences to the JGI DNA Synthesis program, please include the following items: … Sequence files for all constructs should be emailed to  … several easy-to-use open source tools for converting DNA sequence files into well-formed GenBank files. ApE is an …

… about the basics of genome mining, which is using DNA sequence to identify and interpret biosynthetic, secondary … biological perspective, like what was this bacterium, and why did your group want to study it? Marnix Medema: You mean … Tilmann on this. But this also has become very open to the community as well, so the versions of antiSMASH that we …

… of the Joint Genome Institute is to serve the scientific community as a user facility pioneering functional genomics … … For sequencing projects, once work is under way, raw sequence data is released to NCBI’s Sequence Read Archive on a regular basis, in accordance with …

… (see Auspice Statement below) for the generation of sequence or metabolomic data, DNA synthesized, and any other … annotation, comparative analysis, and interpretation of sequence, metabolomics, and functional genomics data types … No. DE-AC02-05CH11231) in collaboration with the user community.” … Read this publication policy in full, …

… sequencing products below. In addition, JGI will submit raw sequence data to  SRA at NCBI once the standard analysis is … in length, cloned into vector of choice Glycerol stock of sequence verified clone 102/NA DNA Synthesis Constructs … separation of a biologically relevant unit from a microbial community, such as a microcolony, microbial aggregate, or a …

… around that. Specifically, we’re going to talk about JGI’s Community Science Program , or CSP, which is the main … at JGI start with sequencing, but where else did those sequences go? Like, what are the other scientific tools we … that describe the work. In general. Scientific merit and why it’s important. The DOE mission is one of these …

… the paradigm of how to discover natural products. So, why I’m very excited to be working with Dan, you, with the … develop enabling technologies. ie how to translate the ATGC sequence into discrete small molecules. So, Dan, I’m very … not only I say we were able to make use of it, but also the community can benefit from the technology. But even better, …

… more than 50,000 genomes that we derived from meta-genome sequences. As always, you’ll find transcripts and show notes … for us– what organisms people use for genome mining, why it’s called genome mining, how the biosynthetic gene … everybody uses, is called antiSMASH . And it is another community effort that’s been built up over the years and is …

… there are any kind of dated references to the news, that’s why. But it was a really fun conversation. And I think … fascinating, I think. DAN UDWARY: Yeah, and that was a JGI Community Sequencing Project. You’re right, yeah. NADINE … it would work, but we actually found fosmids. And we sequenced the whole fosmid at the time with Sanger …

… pipelines.  You will receive automated emails as raw sequence data becomes available, and as analysis is …